RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	MES1	P00958	751 aa	Known RBP	10.12	□□□□□ -0.79
DED1	YOR204W	MTC7	P32633	139 aa		10.12	□□□□□ -0.79
DED1	YOR204W	YER084W	P40057	128 aa		10.12	□□□□□ -0.79
DED1	YOR204W	PUG1	P40100	303 aa		10.12	□□□□□ -0.79
DED1	YOR204W	DLS1	P40366	167 aa		10.12	□□□□□ -0.79
DED1	YOR204W	PHB2	P50085	310 aa		10.12	□□□□□ -0.79
DED1	YOR204W	ACS2	P52910	683 aa	Known RBP	10.12	□□□□□ -0.79
DED1	YOR204W	AAH1	P53909	347 aa		10.12	□□□□□ -0.79
DED1	YOR204W	RCE1	Q03530	315 aa		10.12	□□□□□ -0.79
DED1	YOR204W	TDA1	Q03533	586 aa		10.12	□□□□□ -0.79
DED1	YOR204W	CRR1	Q05790	422 aa		10.12	□□□□□ -0.79
DED1	YOR204W	ORT1	Q12375	292 aa		10.12	□□□□□ -0.79
DED1	YOR204W	QCR7	P00128	127 aa		10.12	□□□□□ -0.79
DED1	YOR204W	CNE1	P27825	502 aa		10.12	□□□□□ -0.79
DED1	YOR204W	TAT1	P38085	619 aa		10.12	□□□□□ -0.79
DED1	YOR204W	SSH1	P38353	490 aa	Known RBP	10.12	□□□□□ -0.79
DED1	YOR204W	IMD3	P50095	523 aa	Known RBP	10.12	□□□□□ -0.79
DED1	YOR204W	YDR387C	Q04162	555 aa		10.12	□□□□□ -0.79
DED1	YOR204W	DCS1	Q06151	350 aa		10.12	□□□□□ -0.79
DED1	YOR204W	RCN2	Q12044	265 aa		10.12	□□□□□ -0.79
DED1	YOR204W	COX17	Q12287	69 aa		10.12	□□□□□ -0.79
DED1	YOR204W	BBP1	Q12365	385 aa		10.12	□□□□□ -0.79
DED1	YOR204W	MBA1	P38300	278 aa		10.11	□□□□□ -0.79
DED1	YOR204W	CTK2	P46962	323 aa		10.11	□□□□□ -0.79
DED1	YOR204W	IRC18	P47056	224 aa		10.11	□□□□□ -0.79
DED1	YOR204W	API2	Q04413	109 aa		10.11	□□□□□ -0.79
DED1	YOR204W	COA4	Q05809	96 aa		10.11	□□□□□ -0.79
DED1	YOR204W	IZH2	Q12442	317 aa		10.11	□□□□□ -0.79
DED1	YOR204W	MSS4	P38994	779 aa		10.1	□□□□□ -0.79
DED1	YOR204W	YFL051C	P43552	160 aa		10.1	□□□□□ -0.79
DED1	YOR204W	MOB2	P43563	287 aa		10.1	□□□□□ -0.79
DED1	YOR204W	TPO3	Q06451	622 aa		10.1	□□□□□ -0.79
DED1	YOR204W	LUC7	Q07508	261 aa	Predicted RBP	10.1	□□□□□ -0.79
DED1	YOR204W	YOR283W	Q12040	230 aa	Known RBP	10.1	□□□□□ -0.79
DED1	YOR204W	FUR4	P05316	633 aa	Known RBP	10.1	□□□□□ -0.79
DED1	YOR204W	CDC36	P06100	191 aa	Predicted RBP	10.1	□□□□□ -0.79
DED1	YOR204W	PUP1	P25043	261 aa		10.1	□□□□□ -0.79
DED1	YOR204W	SPT14	P32363	452 aa		10.1	□□□□□ -0.79
DED1	YOR204W	HTD2	P38790	280 aa	Known RBP	10.1	□□□□□ -0.79
DED1	YOR204W	SEN34	P39707	275 aa		10.1	□□□□□ -0.79
DED1	YOR204W	SCY1	P53009	804 aa		10.1	□□□□□ -0.79
DED1	YOR204W	ISA2	Q12425	185 aa		10.1	□□□□□ -0.79
DED1	YOR204W	KRE6	P32486	720 aa		10.09	□□□□□ -0.79
DED1	YOR204W	BUD8	P41698	603 aa		10.09	□□□□□ -0.79
DED1	YOR204W	ERJ5	P43613	295 aa	Predicted RBP	10.09	□□□□□ -0.79
DED1	YOR204W	SNX4	P47057	423 aa		10.09	□□□□□ -0.79
DED1	YOR204W	YJL016W	P47072	561 aa		10.09	□□□□□ -0.79
DED1	YOR204W	POP6	P53218	158 aa		10.09	□□□□□ -0.79
DED1	YOR204W	FMP48	P53233	369 aa		10.09	□□□□□ -0.79
DED1	YOR204W	MTM1	P53320	366 aa		10.09	□□□□□ -0.79
DED1	YOR204W	INP53	Q12271	1107 aa		10.09	□□□□□ -0.79
DED1	YOR204W	MATALPHA1	P0CY06	175 aa		10.08	□□□□□ -0.8
DED1	YOR204W	HMLALPHA1	P0CY07	175 aa		10.08	□□□□□ -0.8
DED1	YOR204W	PDA1	P16387	420 aa	Known RBP	10.08	□□□□□ -0.8
DED1	YOR204W	RPI1	P23250	407 aa	Known RBP	10.08	□□□□□ -0.8
DED1	YOR204W	BUD23	P25627	275 aa	Predicted RBP	10.08	□□□□□ -0.8
DED1	YOR204W	TOK1	P40310	691 aa		10.08	□□□□□ -0.8
DED1	YOR204W	PEX30	Q06169	523 aa		10.08	□□□□□ -0.8
DED1	YOR204W	FIT3	Q08907	204 aa		10.08	□□□□□ -0.8
DED1	YOR204W	RNH203	Q12338	110 aa		10.08	□□□□□ -0.8
DED1	YOR204W	RCN1	P36054	211 aa		10.07	□□□□□ -0.8
DED1	YOR204W	HPA3	P39979	161 aa		10.07	□□□□□ -0.8
DED1	YOR204W	YJL055W	P47044	245 aa		10.07	□□□□□ -0.8
DED1	YOR204W	ALG12	P53730	551 aa		10.07	□□□□□ -0.8
DED1	YOR204W	RSM23	Q01163	450 aa		10.07	□□□□□ -0.8
DED1	YOR204W	HAS1	Q03532	505 aa	Known RBP	10.07	□□□□□ -0.8
DED1	YOR204W	SCM3	Q12334	223 aa		10.07	□□□□□ -0.8
DED1	YOR204W	LSO2	Q3E772	92 aa	Known RBP	10.07	□□□□□ -0.8
DED1	YOR204W	RPL6A	Q02326	176 aa	Known RBP	10.07	□□□□□ -0.8
DED1	YOR204W	DSF1	P0CX08	502 aa		10.06	□□□□□ -0.8
DED1	YOR204W	YNR073C	P0CX09	502 aa		10.06	□□□□□ -0.8
DED1	YOR204W	DBF20	P32328	564 aa		10.06	□□□□□ -0.8
DED1	YOR204W	CLG1	P35190	452 aa		10.06	□□□□□ -0.8
DED1	YOR204W	APL3	P38065	1025 aa		10.06	□□□□□ -0.8
DED1	YOR204W	RTT105	P40063	208 aa		10.06	□□□□□ -0.8
DED1	YOR204W	YIL060W	P40519	144 aa		10.06	□□□□□ -0.8
DED1	YOR204W	SIP18	P50263	79 aa		10.06	□□□□□ -0.8
DED1	YOR204W	VHT1	P53241	593 aa		10.06	□□□□□ -0.8
DED1	YOR204W	NRK1	P53915	240 aa		10.06	□□□□□ -0.8
DED1	YOR204W	RNH201	P53942	307 aa		10.06	□□□□□ -0.8
DED1	YOR204W	DIG2	Q03373	323 aa	Known RBP	10.06	□□□□□ -0.8
DED1	YOR204W	RGC1	Q06108	1083 aa	Known RBP	10.06	□□□□□ -0.8
DED1	YOR204W	NCE102	Q12207	173 aa	RIP-Chip data	10.06	□□□□□ -0.8	not detected
DED1	YOR204W	SNC2	P33328	115 aa		10.05	□□□□□ -0.8
DED1	YOR204W	YGL159W	P53110	370 aa		10.05	□□□□□ -0.8
DED1	YOR204W	YPL077C	Q02831	240 aa		10.05	□□□□□ -0.8
DED1	YOR204W	FRE3	Q08905	711 aa		10.05	□□□□□ -0.8
DED1	YOR204W	ARO3	P14843	370 aa	Known RBP	10.05	□□□□□ -0.8
DED1	YOR204W	PET18	P25362	215 aa		10.05	□□□□□ -0.8
DED1	YOR204W	MRT4	P33201	236 aa	Known RBP	10.05	□□□□□ -0.8
DED1	YOR204W	FLX1	P40464	311 aa		10.05	□□□□□ -0.8
DED1	YOR204W	QDR1	P40475	563 aa		10.05	□□□□□ -0.8
DED1	YOR204W	SSN8	P47821	323 aa		10.05	□□□□□ -0.8
DED1	YOR204W	PEX10	Q05568	337 aa		10.05	□□□□□ -0.8
DED1	YOR204W	YLR283W	Q05867	314 aa		10.05	□□□□□ -0.8
DED1	YOR204W	YPL199C	Q08954	240 aa		10.05	□□□□□ -0.8
DED1	YOR204W	NAM2	P11325	894 aa		10.04	□□□□□ -0.8
DED1	YOR204W	YBR096W	P38256	230 aa		10.04	□□□□□ -0.8
DED1	YOR204W	YHL037C	P38733	133 aa		10.04	□□□□□ -0.8
DED1	YOR204W	CAT5	P41735	233 aa		10.04	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 96.4 ms