RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C RHO5P53879 331 aaKnown RBP7.73□□□□□ -1.17
RPD3YNL330C SNX41Q04053 625 aa7.73□□□□□ -1.17
RPD3YNL330C BNA7Q04066 261 aa7.73□□□□□ -1.17
RPD3YNL330C CAC2Q04199 468 aa7.73□□□□□ -1.17
RPD3YNL330C YLR030WQ07967 263 aa7.73□□□□□ -1.17
RPD3YNL330C TY1A-DR3Q12441 440 aa7.73□□□□□ -1.17
RPD3YNL330C YJR112W-AQ3E743 109 aa7.73□□□□□ -1.17
RPD3YNL330C PET20Q99373 253 aa7.73□□□□□ -1.17
RPD3YNL330C FAB1P34756 2278 aa7.72□□□□□ -1.17
RPD3YNL330C YLR358CO13565 187 aa7.72□□□□□ -1.17
RPD3YNL330C STE18P18852 110 aa7.72□□□□□ -1.17
RPD3YNL330C TRR1P29509 319 aaKnown RBP7.72□□□□□ -1.17
RPD3YNL330C PMT2P31382 759 aa7.72□□□□□ -1.17
RPD3YNL330C RPD3P32561 433 aa7.72□□□□□ -1.17
RPD3YNL330C WSC4P38739 605 aa7.72□□□□□ -1.17
RPD3YNL330C YJL193WP39542 402 aa7.72□□□□□ -1.17
RPD3YNL330C YHC3P47040 408 aa7.72□□□□□ -1.17
RPD3YNL330C BUL1P48524 976 aa7.72□□□□□ -1.17
RPD3YNL330C NIT3P49954 291 aa7.72□□□□□ -1.17
RPD3YNL330C SEH1P53011 349 aaKnown RBP7.72□□□□□ -1.17
RPD3YNL330C NIF3P53081 288 aa7.72□□□□□ -1.17
RPD3YNL330C RMD9P53140 646 aaKnown RBP7.72□□□□□ -1.17
RPD3YNL330C ERV25P54837 211 aaKnown RBP7.72□□□□□ -1.17
RPD3YNL330C SNP1Q00916 300 aaPredicted RBP7.72□□□□□ -1.17
RPD3YNL330C HEM25Q07534 307 aa7.72□□□□□ -1.17
RPD3YNL330C YRM1Q12340 786 aa7.72□□□□□ -1.17
RPD3YNL330C YOR343CQ12484 108 aa7.72□□□□□ -1.17
RPD3YNL330C PCC1Q3E833 88 aa7.72□□□□□ -1.17
RPD3YNL330C MEX67Q99257 599 aaKnown RBP7.72□□□□□ -1.17
RPD3YNL330C MSW1P04803 379 aa7.71□□□□□ -1.18
RPD3YNL330C DAT1P13483 248 aaKnown RBP7.71□□□□□ -1.18
RPD3YNL330C CTA1P15202 515 aa7.71□□□□□ -1.18
RPD3YNL330C AIM17P23180 465 aaKnown RBP7.71□□□□□ -1.18
RPD3YNL330C MEK1P24719 497 aaPredicted RBP7.71□□□□□ -1.18
RPD3YNL330C MXR2P25566 168 aa7.71□□□□□ -1.18
RPD3YNL330C IMG1P25626 169 aa7.71□□□□□ -1.18
RPD3YNL330C TIP1P27654 210 aaPredicted RBP7.71□□□□□ -1.18
RPD3YNL330C FMT1P32785 401 aa7.71□□□□□ -1.18
RPD3YNL330C KAE1P36132 386 aa7.71□□□□□ -1.18
RPD3YNL330C YIL024CP40543 189 aa7.71□□□□□ -1.18
RPD3YNL330C SHR5P41912 237 aa7.71□□□□□ -1.18
RPD3YNL330C MCM22P47167 239 aa7.71□□□□□ -1.18
RPD3YNL330C BRR6P53062 197 aa7.71□□□□□ -1.18
RPD3YNL330C PNC1P53184 216 aaKnown RBP7.71□□□□□ -1.18
RPD3YNL330C MPA43P53583 542 aaPredicted RBP7.71□□□□□ -1.18
RPD3YNL330C ACT1P60010 375 aaKnown RBP7.71□□□□□ -1.18
RPD3YNL330C RVB1Q03940 463 aaKnown RBP7.71□□□□□ -1.18
RPD3YNL330C NNT1Q05874 261 aa7.71□□□□□ -1.18
RPD3YNL330C SYM1Q06563 197 aa7.71□□□□□ -1.18
RPD3YNL330C SRL2Q12020 392 aa7.71□□□□□ -1.18
RPD3YNL330C VMA9Q3E7B6 73 aa7.71□□□□□ -1.18
RPD3YNL330C RPL1AP0CX43 217 aaKnown RBP7.7□□□□□ -1.18
RPD3YNL330C RPL1BP0CX44 217 aaKnown RBP7.7□□□□□ -1.18
RPD3YNL330C IFM1P25038 676 aa7.7□□□□□ -1.18
RPD3YNL330C KRR1P25586 316 aaPredicted RBP7.7□□□□□ -1.18
RPD3YNL330C YKL162CP36052 402 aa7.7□□□□□ -1.18
RPD3YNL330C SDH8P38345 138 aa7.7□□□□□ -1.18
RPD3YNL330C LNP1P38878 278 aa7.7□□□□□ -1.18
RPD3YNL330C YNL208WP40159 199 aaKnown RBP7.7□□□□□ -1.18
RPD3YNL330C SLZ1P40167 298 aa7.7□□□□□ -1.18
RPD3YNL330C YIL152WP40455 235 aa7.7□□□□□ -1.18
RPD3YNL330C YIR035CP40579 254 aa7.7□□□□□ -1.18
RPD3YNL330C BUD8P41698 603 aa7.7□□□□□ -1.18
RPD3YNL330C ERJ5P43613 295 aaPredicted RBP7.7□□□□□ -1.18
RPD3YNL330C ACS2P52910 683 aaKnown RBP7.7□□□□□ -1.18
RPD3YNL330C PET191Q02772 108 aa7.7□□□□□ -1.18
RPD3YNL330C YML018CQ03730 393 aa7.7□□□□□ -1.18
RPD3YNL330C PAL1Q05518 499 aaKnown RBP7.7□□□□□ -1.18
RPD3YNL330C STP3Q05937 343 aa7.7□□□□□ -1.18
RPD3YNL330C BNA5Q05979 453 aa7.7□□□□□ -1.18
RPD3YNL330C IRC19Q07843 230 aa7.7□□□□□ -1.18
RPD3YNL330C ZEO1Q08245 113 aa7.7□□□□□ -1.18
RPD3YNL330C REX3Q12090 404 aa7.7□□□□□ -1.18
RPD3YNL330C HBN1Q96VH4 193 aa7.7□□□□□ -1.18
RPD3YNL330C ISN1Q99312 450 aa7.7□□□□□ -1.18
RPD3YNL330C TPI1P00942 248 aaKnown RBP7.69□□□□□ -1.18
RPD3YNL330C RPS31P05759 152 aaKnown RBP7.69□□□□□ -1.18
RPD3YNL330C UBI4P0CG63 381 aaKnown RBP7.69□□□□□ -1.18
RPD3YNL330C RPL40AP0CH08 128 aaKnown RBP7.69□□□□□ -1.18
RPD3YNL330C RPL40BP0CH09 128 aaKnown RBP7.69□□□□□ -1.18
RPD3YNL330C ARF1P11076 181 aaKnown RBP7.69□□□□□ -1.18
RPD3YNL330C NAM2P11325 894 aa7.69□□□□□ -1.18
RPD3YNL330C PPA2P28239 310 aa7.69□□□□□ -1.18
RPD3YNL330C POP8P38208 133 aa7.69□□□□□ -1.18
RPD3YNL330C UMP1P38293 148 aa7.69□□□□□ -1.18
RPD3YNL330C IKI1P38874 309 aa7.69□□□□□ -1.18
RPD3YNL330C YFR054CP43622 192 aa7.69□□□□□ -1.18
RPD3YNL330C YGL117WP53133 265 aa7.69□□□□□ -1.18
RPD3YNL330C SAM50P53969 484 aa7.69□□□□□ -1.18
RPD3YNL330C BER1Q06688 274 aaKnown RBP7.69□□□□□ -1.18
RPD3YNL330C MIM1Q08176 113 aa7.69□□□□□ -1.18
RPD3YNL330C YPL272CQ08984 517 aa7.69□□□□□ -1.18
RPD3YNL330C FCF2Q12035 217 aaPredicted RBP7.69□□□□□ -1.18
RPD3YNL330C MCT1Q12283 360 aa7.69□□□□□ -1.18
RPD3YNL330C ARO3P14843 370 aaKnown RBP7.68□□□□□ -1.18
RPD3YNL330C STP22P25604 385 aa7.68□□□□□ -1.18
RPD3YNL330C VMA5P31412 392 aaKnown RBP7.68□□□□□ -1.18
RPD3YNL330C MCM10P32354 571 aa7.68□□□□□ -1.18
RPD3YNL330C MRPL15P36523 253 aa7.68□□□□□ -1.18
RPD3YNL330C FRM2P37261 193 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms