RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C TY2A-OR1Q12439 438 aa3.01□□□□□ -1.93
SQS1YNL224C POM34Q12445 299 aa3.01□□□□□ -1.93
SQS1YNL224C TY2A-DR3Q99303 438 aa3.01□□□□□ -1.93
SQS1YNL224C YOR338WQ99326 363 aa3.01□□□□□ -1.93
SQS1YNL224C YOR1P53049 1477 aa3.01□□□□□ -1.93
SQS1YNL224C RPL18AP0CX49 186 aaKnown RBP3.01□□□□□ -1.93
SQS1YNL224C RPL18BP0CX50 186 aaKnown RBP3.01□□□□□ -1.93
SQS1YNL224C EPT1P22140 391 aa3.01□□□□□ -1.93
SQS1YNL224C SCO1P23833 295 aa3.01□□□□□ -1.93
SQS1YNL224C MSK1P32048 576 aa3.01□□□□□ -1.93
SQS1YNL224C SPS18P32572 300 aa3.01□□□□□ -1.93
SQS1YNL224C MRPL24P36525 258 aaPredicted RBP3.01□□□□□ -1.93
SQS1YNL224C ETR1P38071 380 aa3.01□□□□□ -1.93
SQS1YNL224C TSL1P38427 1098 aaKnown RBP3.01□□□□□ -1.93
SQS1YNL224C YGP1P38616 354 aaKnown RBP3.01□□□□□ -1.93
SQS1YNL224C DOG2P38773 246 aa3.01□□□□□ -1.93
SQS1YNL224C KRE29P40026 464 aa3.01□□□□□ -1.93
SQS1YNL224C YER188WP40103 239 aa3.01□□□□□ -1.93
SQS1YNL224C IRC8P47046 822 aa3.01□□□□□ -1.93
SQS1YNL224C SKP1P52286 194 aa3.01□□□□□ -1.93
SQS1YNL224C GTF1P53260 183 aaPredicted RBP3.01□□□□□ -1.93
SQS1YNL224C NCE103P53615 221 aa3.01□□□□□ -1.93
SQS1YNL224C TEX1P53851 422 aaKnown RBP3.01□□□□□ -1.93
SQS1YNL224C HSK3P69852 69 aa3.01□□□□□ -1.93
SQS1YNL224C SDH7Q04401 133 aa3.01□□□□□ -1.93
SQS1YNL224C PRM6Q04705 352 aa3.01□□□□□ -1.93
SQS1YNL224C YLR407WQ06070 228 aa3.01□□□□□ -1.93
SQS1YNL224C YET3Q07451 203 aa3.01□□□□□ -1.93
SQS1YNL224C AAD4Q07747 329 aa3.01□□□□□ -1.93
SQS1YNL224C ATG10Q07879 167 aa3.01□□□□□ -1.93
SQS1YNL224C PLB3Q08108 686 aa3.01□□□□□ -1.93
SQS1YNL224C THP1Q08231 455 aa3.01□□□□□ -1.93
SQS1YNL224C ALG6Q12001 544 aaKnown RBP3.01□□□□□ -1.93
SQS1YNL224C AHA1Q12449 350 aaKnown RBP3.01□□□□□ -1.93
SQS1YNL224C YPR015CQ12531 247 aa3.01□□□□□ -1.93
SQS1YNL224C SPO24Q3E752 67 aa3.01□□□□□ -1.93
SQS1YNL224C NUP159P40477 1460 aa3□□□□□ -1.93
SQS1YNL224C ATR1P13090 542 aa3□□□□□ -1.93
SQS1YNL224C FUN14P18411 198 aa3□□□□□ -1.93
SQS1YNL224C EXO70P19658 623 aa3□□□□□ -1.93
SQS1YNL224C MBR1P23493 339 aa3□□□□□ -1.93
SQS1YNL224C VMA3P25515 160 aa3□□□□□ -1.93
SQS1YNL224C MLF3P32047 452 aa3□□□□□ -1.93
SQS1YNL224C YEF1P32622 495 aa3□□□□□ -1.93
SQS1YNL224C PPZ2P33329 710 aa3□□□□□ -1.93
SQS1YNL224C LSM2P38203 95 aaKnown RBP3□□□□□ -1.93
SQS1YNL224C ARO9P38840 513 aaPredicted RBP3□□□□□ -1.93
SQS1YNL224C PNT1P38969 423 aa3□□□□□ -1.93
SQS1YNL224C PAN6P40459 309 aa3□□□□□ -1.93
SQS1YNL224C VHS2P40463 436 aa3□□□□□ -1.93
SQS1YNL224C YJL107CP42947 387 aa3□□□□□ -1.93
SQS1YNL224C YFL064CP43540 174 aa3□□□□□ -1.93
SQS1YNL224C YGR149WP48236 432 aa3□□□□□ -1.93
SQS1YNL224C ASN1P49089 572 aaKnown RBP3□□□□□ -1.93
SQS1YNL224C AVT4P50944 713 aa3□□□□□ -1.93
SQS1YNL224C ERG25P53045 309 aa3□□□□□ -1.93
SQS1YNL224C KTR5P53966 522 aaPredicted RBP3□□□□□ -1.93
SQS1YNL224C HHT1P61830 136 aa3□□□□□ -1.93
SQS1YNL224C APS2Q00381 147 aa3□□□□□ -1.93
SQS1YNL224C LGE1Q02796 332 aaKnown RBP3□□□□□ -1.93
SQS1YNL224C SRT1Q03175 343 aa3□□□□□ -1.93
SQS1YNL224C DIG2Q03373 323 aaKnown RBP3□□□□□ -1.93
SQS1YNL224C AIM36Q03798 255 aa3□□□□□ -1.93
SQS1YNL224C YDR415CQ04033 374 aaPredicted RBP3□□□□□ -1.93
SQS1YNL224C SIZ1Q04195 904 aa3□□□□□ -1.93
SQS1YNL224C YMR074CQ04773 145 aa3□□□□□ -1.93
SQS1YNL224C YPR202WQ08993 238 aa3□□□□□ -1.93
SQS1YNL224C FRE8Q12209 686 aa3□□□□□ -1.93
SQS1YNL224C ULS1Q08562 1619 aa3□□□□□ -1.93
SQS1YNL224C SAL1D6W196 494 aa2.99□□□□□ -1.93
SQS1YNL224C YLR302CO13544 120 aa2.99□□□□□ -1.93
SQS1YNL224C YLR462WO13556 202 aa2.99□□□□□ -1.93
SQS1YNL224C GAL80P04387 435 aa2.99□□□□□ -1.93
SQS1YNL224C CDC4P07834 779 aa2.99□□□□□ -1.93
SQS1YNL224C YKR104WP0CE69 306 aa2.99□□□□□ -1.93
SQS1YNL224C BAR1P12630 587 aa2.99□□□□□ -1.93
SQS1YNL224C SPT15P13393 240 aaKnown RBP2.99□□□□□ -1.93
SQS1YNL224C YCR102CP25608 368 aa2.99□□□□□ -1.93
SQS1YNL224C ARO2P28777 376 aaKnown RBP2.99□□□□□ -1.93
SQS1YNL224C PTM1P32857 523 aa2.99□□□□□ -1.93
SQS1YNL224C MRPS5P33759 307 aa2.99□□□□□ -1.93
SQS1YNL224C SCD5P34758 872 aa2.99□□□□□ -1.93
SQS1YNL224C EHT1P38295 451 aa2.99□□□□□ -1.93
SQS1YNL224C YBR285WP38354 144 aa2.99□□□□□ -1.93
SQS1YNL224C YHL026CP38740 315 aa2.99□□□□□ -1.93
SQS1YNL224C MET30P39014 640 aa2.99□□□□□ -1.93
SQS1YNL224C HEM14P40012 539 aa2.99□□□□□ -1.93
SQS1YNL224C SCD6P45978 349 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
SQS1YNL224C GWT1P47026 490 aa2.99□□□□□ -1.93
SQS1YNL224C YDL186WP48568 277 aa2.99□□□□□ -1.93
SQS1YNL224C CLD1P53264 445 aa2.99□□□□□ -1.93
SQS1YNL224C SLM2P53955 656 aa2.99□□□□□ -1.93
SQS1YNL224C GRX8Q05926 109 aa2.99□□□□□ -1.93
SQS1YNL224C THI21Q08975 551 aa2.99□□□□□ -1.93
SQS1YNL224C MDM32Q12171 622 aa2.99□□□□□ -1.93
SQS1YNL224C TFC7Q12415 435 aa2.99□□□□□ -1.93
SQS1YNL224C YBL112CQ3E7Y4 105 aa2.99□□□□□ -1.93
SQS1YNL224C UTP10P42945 1769 aaKnown RBP2.99□□□□□ -1.93
SQS1YNL224C PDR5P33302 1511 aaKnown RBP2.99□□□□□ -1.93
SQS1YNL224C CYC7P00045 113 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms