RNA–Protein interactions for RNA: YMR180C

CTL1, Transcript of RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm, yeastyeast

Gene CTL1, Length 963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTL1YMR180C TIM21P53220 239 aa2.51□□□□□ -2.01
CTL1YMR180C CGI121Q03705 181 aaKnown RBP2.51□□□□□ -2.01
CTL1YMR180C YMR114CQ04471 368 aaKnown RBP2.51□□□□□ -2.01
CTL1YMR180C SPO77Q06134 477 aa2.51□□□□□ -2.01
CTL1YMR180C SMT3Q12306 101 aaKnown RBP2.51□□□□□ -2.01
CTL1YMR180C MET16P18408 261 aaPredicted RBP2.5□□□□□ -2.01
CTL1YMR180C SFC1P33303 322 aa2.5□□□□□ -2.01
CTL1YMR180C HEK2P38199 381 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01 RIP-Chip
CTL1YMR180C COA1P40452 197 aa2.5□□□□□ -2.01
CTL1YMR180C AGX1P43567 385 aa2.5□□□□□ -2.01
CTL1YMR180C SLM2P53955 656 aa2.5□□□□□ -2.01
CTL1YMR180C GEP5Q12393 293 aa2.5□□□□□ -2.01
CTL1YMR180C PPH21P23594 369 aa2.49□□□□□ -2.01
CTL1YMR180C COG3P40094 801 aa2.49□□□□□ -2.01
CTL1YMR180C EMI1Q04406 187 aa2.49□□□□□ -2.01
CTL1YMR180C GMC2Q06201 188 aa2.49□□□□□ -2.01
CTL1YMR180C CTR3Q06686 241 aa2.49□□□□□ -2.01
CTL1YMR180C TEM1P38987 245 aa2.48□□□□□ -2.01
CTL1YMR180C TAD2P47058 250 aa2.48□□□□□ -2.01
CTL1YMR180C YJL016WP47072 561 aa2.48□□□□□ -2.01
CTL1YMR180C DAN1P47178 298 aa2.48□□□□□ -2.01
CTL1YMR180C TY3A-GQ12173 290 aa2.48□□□□□ -2.01
CTL1YMR180C TY3A-IQ99219 290 aa2.48□□□□□ -2.01
CTL1YMR180C YGP1P38616 354 aaKnown RBP2.47□□□□□ -2.01
CTL1YMR180C SPT8P38915 602 aa2.47□□□□□ -2.01
CTL1YMR180C SHC1P39000 512 aa2.47□□□□□ -2.01
CTL1YMR180C SLX9P53251 210 aaPredicted RBP2.47□□□□□ -2.01
CTL1YMR180C COS6P53344 381 aa2.47□□□□□ -2.01
CTL1YMR180C AAH1P53909 347 aa2.47□□□□□ -2.01
CTL1YMR180C BOP2Q06150 570 aa2.47□□□□□ -2.01
CTL1YMR180C YOR283WQ12040 230 aaKnown RBP2.47□□□□□ -2.01
CTL1YMR180C SME1Q12330 94 aaPredicted RBP2.47□□□□□ -2.01
CTL1YMR180C STH1P32597 1359 aa2.47□□□□□ -2.01
CTL1YMR180C RNP1P32385 249 aa2.46□□□□□ -2.02
CTL1YMR180C MAL32P38158 584 aa2.46□□□□□ -2.02
CTL1YMR180C PRM9P39551 298 aa2.46□□□□□ -2.02
CTL1YMR180C NBP1P52919 319 aaPredicted RBP2.46□□□□□ -2.02
CTL1YMR180C MAL13P53338 473 aa2.46□□□□□ -2.02
CTL1YMR180C MAL12P53341 584 aa2.46□□□□□ -2.02
CTL1YMR180C SSK22P25390 1331 aaPredicted RBP2.45□□□□□ -2.02
CTL1YMR180C ECM13P38195 257 aa2.45□□□□□ -2.02
CTL1YMR180C KAP114P53067 1004 aa2.45□□□□□ -2.02
CTL1YMR180C OST6Q03723 332 aa2.45□□□□□ -2.02
CTL1YMR180C PST1Q12355 444 aa2.45□□□□□ -2.02
CTL1YMR180C RCY1P39531 840 aa2.44□□□□□ -2.02
CTL1YMR180C PEX10Q05568 337 aa2.44□□□□□ -2.02
CTL1YMR180C SCO1P23833 295 aa2.43□□□□□ -2.02
CTL1YMR180C DDI1P40087 428 aa2.43□□□□□ -2.02
CTL1YMR180C TIF34P40217 347 aaKnown RBP2.43□□□□□ -2.02
CTL1YMR180C MRPL49P40858 161 aaPredicted RBP2.43□□□□□ -2.02
CTL1YMR180C GPI8P49018 411 aa2.43□□□□□ -2.02
CTL1YMR180C RSM10Q03201 203 aa2.43□□□□□ -2.02
CTL1YMR180C YPR011CQ12251 326 aa2.43□□□□□ -2.02
CTL1YMR180C COX2P00410 251 aa2.42□□□□□ -2.02
CTL1YMR180C HIS1P00498 297 aaKnown RBP2.42□□□□□ -2.02
CTL1YMR180C DRE2P36152 348 aa2.42□□□□□ -2.02
CTL1YMR180C NRG2P38082 220 aa2.42□□□□□ -2.02
CTL1YMR180C FCY21P40039 528 aa2.42□□□□□ -2.02
CTL1YMR180C YJL118WP47022 219 aa2.42□□□□□ -2.02
CTL1YMR180C YJR012CP47087 207 aa2.42□□□□□ -2.02
CTL1YMR180C YGL034CP53186 121 aa2.42□□□□□ -2.02
CTL1YMR180C EBS1Q03466 884 aaKnown RBP2.42□□□□□ -2.02
CTL1YMR180C DCR2Q05924 578 aa2.42□□□□□ -2.02
CTL1YMR180C SLD7Q08457 257 aa2.42□□□□□ -2.02
CTL1YMR180C OM45P16547 393 aa2.41□□□□□ -2.02
CTL1YMR180C CWP1P28319 239 aa2.41□□□□□ -2.02
CTL1YMR180C MRPL37P36532 105 aa2.41□□□□□ -2.02
CTL1YMR180C GRE3P38715 327 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
CTL1YMR180C YHL026CP38740 315 aa2.41□□□□□ -2.02
CTL1YMR180C DSN1P40568 576 aa2.41□□□□□ -2.02
CTL1YMR180C YJL027CP47063 138 aaPredicted RBP2.41□□□□□ -2.02
CTL1YMR180C PEX12Q04370 399 aa2.41□□□□□ -2.02
CTL1YMR180C COX20Q04935 205 aa2.41□□□□□ -2.02
CTL1YMR180C YPL119C-AQ3E751 87 aa2.41□□□□□ -2.02
CTL1YMR180C SGA1P08019 549 aa2.4□□□□□ -2.03
CTL1YMR180C POX1P13711 748 aa2.4□□□□□ -2.03
CTL1YMR180C QRI5P32344 111 aa2.4□□□□□ -2.03
CTL1YMR180C EMC2P47133 292 aaKnown RBP2.4□□□□□ -2.03
CTL1YMR180C EMC6Q12431 108 aa2.4□□□□□ -2.03
CTL1YMR180C YHR086W-AQ3E746 53 aa2.4□□□□□ -2.03
CTL1YMR180C POL30P15873 258 aaKnown RBP2.39□□□□□ -2.03
CTL1YMR180C YCR102CP25608 368 aa2.39□□□□□ -2.03
CTL1YMR180C EHD3P28817 500 aa2.39□□□□□ -2.03
CTL1YMR180C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
CTL1YMR180C YBL008W-AQ3E821 79 aa2.39□□□□□ -2.03
CTL1YMR180C RAD3P06839 778 aa2.38□□□□□ -2.03
CTL1YMR180C YOR062CP36025 268 aa2.38□□□□□ -2.03
CTL1YMR180C RTT105P40063 208 aa2.38□□□□□ -2.03
CTL1YMR180C YAR1P46683 200 aa2.38□□□□□ -2.03
CTL1YMR180C ALG11P53954 548 aaKnown RBP2.38□□□□□ -2.03
CTL1YMR180C EMP46Q12396 444 aa2.38□□□□□ -2.03
CTL1YMR180C SAS5Q99314 248 aa2.38□□□□□ -2.03
CTL1YMR180C RPL24AP04449 155 aaKnown RBP2.37□□□□□ -2.03
CTL1YMR180C PRS2P38620 318 aaKnown RBP2.37□□□□□ -2.03
CTL1YMR180C MEP1P40260 492 aa2.37□□□□□ -2.03
CTL1YMR180C RPL10P41805 221 aaKnown RBP2.37□□□□□ -2.03
CTL1YMR180C YLR179CQ06252 201 aaKnown RBP2.37□□□□□ -2.03
CTL1YMR180C SCM4P32564 187 aa2.36□□□□□ -2.03
CTL1YMR180C PRS4P38063 326 aaPredicted RBP2.36□□□□□ -2.03
CTL1YMR180C OST2P46964 130 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms