RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YHC3P47040 408 aa3.96□□□□□ -1.78
CCS1YMR038C YNL033WP53964 284 aa3.96□□□□□ -1.78
CCS1YMR038C YNL019CP53975 284 aa3.96□□□□□ -1.78
CCS1YMR038C RPL6AQ02326 176 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C PRM15Q03262 622 aa3.96□□□□□ -1.78
CCS1YMR038C RIM9Q04734 239 aa3.96□□□□□ -1.78
CCS1YMR038C SYO1Q07395 620 aa3.96□□□□□ -1.78
CCS1YMR038C CSI2Q08054 341 aa3.96□□□□□ -1.78
CCS1YMR038C COQ10Q08058 207 aa3.96□□□□□ -1.78
CCS1YMR038C RRT8Q08219 342 aa3.96□□□□□ -1.78
CCS1YMR038C RTC5Q12108 567 aaKnown RBP3.96□□□□□ -1.78
CCS1YMR038C YDL199CQ12407 687 aa3.96□□□□□ -1.78
CCS1YMR038C TIM9O74700 87 aa3.95□□□□□ -1.78
CCS1YMR038C YOL163WP0CF20 169 aa3.95□□□□□ -1.78
CCS1YMR038C RPS8AP0CX39 200 aaKnown RBP3.95□□□□□ -1.78
CCS1YMR038C RPS8BP0CX40 200 aaKnown RBP3.95□□□□□ -1.78
CCS1YMR038C SPO7P18410 259 aa3.95□□□□□ -1.78
CCS1YMR038C BUD5P25300 642 aaPredicted RBP3.95□□□□□ -1.78
CCS1YMR038C RPS2P25443 254 aaKnown RBP3.95□□□□□ -1.78
CCS1YMR038C SNC1P31109 117 aa3.95□□□□□ -1.78
CCS1YMR038C PUP2P32379 260 aa3.95□□□□□ -1.78
CCS1YMR038C GPX1P36014 167 aa3.95□□□□□ -1.78
CCS1YMR038C JEN1P36035 616 aa3.95□□□□□ -1.78
CCS1YMR038C PHD1P36093 366 aa3.95□□□□□ -1.78
CCS1YMR038C SPC34P36131 295 aa3.95□□□□□ -1.78
CCS1YMR038C TRM5P38793 499 aa3.95□□□□□ -1.78
CCS1YMR038C YHR218WP38899 603 aa3.95□□□□□ -1.78
CCS1YMR038C MPM1P40364 252 aa3.95□□□□□ -1.78
CCS1YMR038C IMD4P50094 524 aaKnown RBP3.95□□□□□ -1.78
CCS1YMR038C MTM1P53320 366 aa3.95□□□□□ -1.78
CCS1YMR038C MPP6P53725 186 aaPredicted RBP3.95□□□□□ -1.78
CCS1YMR038C CTS2Q06350 511 aa3.95□□□□□ -1.78
CCS1YMR038C THP1Q08231 455 aa3.95□□□□□ -1.78
CCS1YMR038C SFM1Q12314 213 aa3.95□□□□□ -1.78
CCS1YMR038C WTM1Q12363 437 aaKnown RBP3.95□□□□□ -1.78
CCS1YMR038C RPS5P26783 225 aaKnown RBP3.94□□□□□ -1.78
CCS1YMR038C PPA2P28239 310 aa3.94□□□□□ -1.78
CCS1YMR038C PEX3P28795 441 aa3.94□□□□□ -1.78
CCS1YMR038C IDH1P28834 360 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
CCS1YMR038C CAM1P29547 415 aaKnown RBP3.94□□□□□ -1.78
CCS1YMR038C SSE2P32590 693 aaKnown RBP3.94□□□□□ -1.78
CCS1YMR038C TOA1P32773 286 aa3.94□□□□□ -1.78
CCS1YMR038C TRS65P32893 560 aa3.94□□□□□ -1.78
CCS1YMR038C NUF2P33895 451 aa3.94□□□□□ -1.78
CCS1YMR038C ECM15P35195 104 aa3.94□□□□□ -1.78
CCS1YMR038C YBR063CP38083 404 aa3.94□□□□□ -1.78
CCS1YMR038C SRO77P38163 1010 aa3.94□□□□□ -1.78
CCS1YMR038C PEX18P38855 283 aa3.94□□□□□ -1.78
CCS1YMR038C YDL186WP48568 277 aa3.94□□□□□ -1.78
CCS1YMR038C UBC13P52490 153 aa3.94□□□□□ -1.78
CCS1YMR038C YGL235WP53071 178 aa3.94□□□□□ -1.78
CCS1YMR038C SUB1P54000 292 aaKnown RBP3.94□□□□□ -1.78
CCS1YMR038C YPL077CQ02831 240 aa3.94□□□□□ -1.78
CCS1YMR038C RVB1Q03940 463 aaKnown RBP3.94□□□□□ -1.78
CCS1YMR038C DBP9Q06218 594 aaKnown RBP3.94□□□□□ -1.78
CCS1YMR038C GGA1Q06336 557 aa3.94□□□□□ -1.78
CCS1YMR038C YPR127WQ06494 345 aa3.94□□□□□ -1.78
CCS1YMR038C GPI11Q06636 219 aa3.94□□□□□ -1.78
CCS1YMR038C GAT3Q07928 141 aa3.94□□□□□ -1.78
CCS1YMR038C MUM3Q08750 479 aa3.94□□□□□ -1.78
CCS1YMR038C FIT3Q08907 204 aa3.94□□□□□ -1.78
CCS1YMR038C MRX4Q12467 430 aa3.94□□□□□ -1.78
CCS1YMR038C RAD7P06779 565 aa3.93□□□□□ -1.78
CCS1YMR038C OLE1P21147 510 aaKnown RBP3.93□□□□□ -1.78
CCS1YMR038C PCL1P24867 279 aa3.93□□□□□ -1.78
CCS1YMR038C MDH3P32419 343 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
CCS1YMR038C MNS1P32906 549 aa3.93□□□□□ -1.78
CCS1YMR038C CLB6P32943 380 aa3.93□□□□□ -1.78
CCS1YMR038C TIF3P34167 436 aaKnown RBP3.93□□□□□ -1.78
CCS1YMR038C YBR144CP34215 104 aa3.93□□□□□ -1.78
CCS1YMR038C SPT10P35208 640 aa3.93□□□□□ -1.78
CCS1YMR038C YKL071WP36086 256 aa3.93□□□□□ -1.78
CCS1YMR038C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
CCS1YMR038C YDR415CQ04033 374 aaPredicted RBP3.93□□□□□ -1.78
CCS1YMR038C ADH6Q04894 360 aaKnown RBP3.93□□□□□ -1.78
CCS1YMR038C MHF2Q3E829 80 aa3.93□□□□□ -1.78
CCS1YMR038C YOL162WP0CF19 215 aa3.92□□□□□ -1.78
CCS1YMR038C BOS1P25385 244 aa3.92□□□□□ -1.78
CCS1YMR038C ATP7P30902 174 aa3.92□□□□□ -1.78
CCS1YMR038C NTG1P31378 399 aa3.92□□□□□ -1.78
CCS1YMR038C VPH2P32341 215 aa3.92□□□□□ -1.78
CCS1YMR038C MSN4P33749 630 aa3.92□□□□□ -1.78
CCS1YMR038C PAD1P33751 242 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
CCS1YMR038C LTV1P34078 463 aa3.92□□□□□ -1.78
CCS1YMR038C ALP1P38971 573 aa3.92□□□□□ -1.78
CCS1YMR038C GDI1P39958 451 aaKnown RBP3.92□□□□□ -1.78
CCS1YMR038C BAT2P47176 376 aaKnown RBP3.92□□□□□ -1.78
CCS1YMR038C GPI1P53306 609 aa3.92□□□□□ -1.78
CCS1YMR038C SMM1P53720 384 aaKnown RBP3.92□□□□□ -1.78
CCS1YMR038C RRN5Q02983 363 aa3.92□□□□□ -1.78
CCS1YMR038C YMR279CQ03263 540 aa3.92□□□□□ -1.78
CCS1YMR038C DML1Q03652 475 aa3.92□□□□□ -1.78
CCS1YMR038C SEC13Q04491 297 aaKnown RBP3.92□□□□□ -1.78
CCS1YMR038C TAZ1Q06510 381 aa3.92□□□□□ -1.78
CCS1YMR038C ASA1Q06822 443 aa3.92□□□□□ -1.78
CCS1YMR038C UIP4Q08926 304 aa3.92□□□□□ -1.78
CCS1YMR038C FRE8Q12209 686 aa3.92□□□□□ -1.78
CCS1YMR038C IZH2Q12442 317 aa3.92□□□□□ -1.78
CCS1YMR038C CPR2P23285 205 aa3.91□□□□□ -1.78
CCS1YMR038C ACH1P32316 526 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms