RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C ADO1P47143 340 aaKnown RBP8.09□□□□□ -1.11
SEC61YLR378C YIP4P53093 235 aa8.09□□□□□ -1.11
SEC61YLR378C MTL1P53214 551 aa8.09□□□□□ -1.11
SEC61YLR378C YGR042WP53227 271 aa8.09□□□□□ -1.11
SEC61YLR378C RDI1Q12434 202 aa8.09□□□□□ -1.11
SEC61YLR378C ODC2Q99297 307 aa8.09□□□□□ -1.11
SEC61YLR378C FLO9P39712 1322 aa8.08□□□□□ -1.12
SEC61YLR378C CDC36P06100 191 aaPredicted RBP8.08□□□□□ -1.12
SEC61YLR378C ADH7P25377 361 aa8.08□□□□□ -1.12
SEC61YLR378C MSS1P32559 526 aaPredicted RBP8.08□□□□□ -1.12
SEC61YLR378C UTP30P36144 274 aaKnown RBP8.08□□□□□ -1.12
SEC61YLR378C AIM3P38266 947 aaKnown RBP8.08□□□□□ -1.12
SEC61YLR378C VMA22P38784 181 aa8.08□□□□□ -1.12
SEC61YLR378C RSM23Q01163 450 aa8.08□□□□□ -1.12
SEC61YLR378C YDR387CQ04162 555 aa8.08□□□□□ -1.12
SEC61YLR378C TY1A-MR1Q04215 440 aa8.08□□□□□ -1.12
SEC61YLR378C HEM25Q07534 307 aa8.08□□□□□ -1.12
SEC61YLR378C YLR031WQ07978 186 aa8.08□□□□□ -1.12
SEC61YLR378C YPL272CQ08984 517 aa8.08□□□□□ -1.12
SEC61YLR378C SGA1P08019 549 aa8.07□□□□□ -1.12
SEC61YLR378C CHO1P08456 276 aa8.07□□□□□ -1.12
SEC61YLR378C RPS16AP0CX51 143 aaKnown RBP8.07□□□□□ -1.12
SEC61YLR378C RPS16BP0CX52 143 aaKnown RBP8.07□□□□□ -1.12
SEC61YLR378C NHP6BP11633 99 aaKnown RBP8.07□□□□□ -1.12
SEC61YLR378C GRX2P17695 143 aaKnown RBP8.07□□□□□ -1.12
SEC61YLR378C YCP4P25349 247 aaKnown RBP8.07□□□□□ -1.12
SEC61YLR378C PET18P25362 215 aa8.07□□□□□ -1.12
SEC61YLR378C IDP2P41939 412 aa8.07□□□□□ -1.12
SEC61YLR378C YJL016WP47072 561 aa8.07□□□□□ -1.12
SEC61YLR378C FMP48P53233 369 aa8.07□□□□□ -1.12
SEC61YLR378C PCP1P53259 346 aa8.07□□□□□ -1.12
SEC61YLR378C MRPL50P53724 139 aa8.07□□□□□ -1.12
SEC61YLR378C BUD25P85052 153 aa8.07□□□□□ -1.12
SEC61YLR378C HNT1Q04344 158 aaKnown RBP8.07□□□□□ -1.12
SEC61YLR378C HRI1Q05905 244 aaKnown RBP8.07□□□□□ -1.12
SEC61YLR378C RSC58Q07979 502 aa8.07□□□□□ -1.12
SEC61YLR378C SEN1Q00416 2231 aaKnown RBP8.07□□□□□ -1.12
SEC61YLR378C YLR358CO13565 187 aa8.06□□□□□ -1.12
SEC61YLR378C TDH2P00358 332 aaKnown RBP8.06□□□□□ -1.12
SEC61YLR378C URA6P15700 204 aa8.06□□□□□ -1.12
SEC61YLR378C UMP1P38293 148 aa8.06□□□□□ -1.12
SEC61YLR378C MGE1P38523 228 aa8.06□□□□□ -1.12
SEC61YLR378C RPS26AP39938 119 aaKnown RBP8.06□□□□□ -1.12
SEC61YLR378C RPS26BP39939 119 aaKnown RBP8.06□□□□□ -1.12
SEC61YLR378C YIL169CP40442 995 aa8.06□□□□□ -1.12
SEC61YLR378C YIL060WP40519 144 aa8.06□□□□□ -1.12
SEC61YLR378C BXI1P48558 297 aa8.06□□□□□ -1.12
SEC61YLR378C RSM27P53305 110 aa8.06□□□□□ -1.12
SEC61YLR378C ELA1P53861 379 aaPredicted RBP8.06□□□□□ -1.12
SEC61YLR378C MRPL19P53875 158 aa8.06□□□□□ -1.12
SEC61YLR378C RNH201P53942 307 aa8.06□□□□□ -1.12
SEC61YLR378C RPL6AQ02326 176 aaKnown RBP8.06□□□□□ -1.12
SEC61YLR378C MRP51Q02950 344 aa8.06□□□□□ -1.12
SEC61YLR378C NGL2Q03264 515 aaKnown RBP8.06□□□□□ -1.12
SEC61YLR378C TY1A-DR2Q03964 440 aaKnown RBP8.06□□□□□ -1.12
SEC61YLR378C YPL278CQ08990 100 aa8.06□□□□□ -1.12
SEC61YLR378C YDL180WQ12301 547 aa8.06□□□□□ -1.12
SEC61YLR378C ISA2Q12425 185 aa8.06□□□□□ -1.12
SEC61YLR378C COX5BP00425 151 aa8.05□□□□□ -1.12
SEC61YLR378C MES1P00958 751 aaKnown RBP8.05□□□□□ -1.12
SEC61YLR378C SED4P25365 1065 aa8.05□□□□□ -1.12
SEC61YLR378C MRT4P33201 236 aaKnown RBP8.05□□□□□ -1.12
SEC61YLR378C MOH1P38191 138 aa8.05□□□□□ -1.12
SEC61YLR378C NIT3P49954 291 aa8.05□□□□□ -1.12
SEC61YLR378C YNR048WP53740 393 aa8.05□□□□□ -1.12
SEC61YLR378C YNL165WP53891 406 aa8.05□□□□□ -1.12
SEC61YLR378C YMR265CQ03508 461 aaKnown RBP8.05□□□□□ -1.12
SEC61YLR378C PLP1Q04004 230 aa8.05□□□□□ -1.12
SEC61YLR378C YLR283WQ05867 314 aa8.05□□□□□ -1.12
SEC61YLR378C GAS2Q06135 555 aa8.05□□□□□ -1.12
SEC61YLR378C BLM10P43583 2143 aa8.05□□□□□ -1.12
SEC61YLR378C RPL7AP05737 244 aaKnown RBP8.04□□□□□ -1.12
SEC61YLR378C RPL3P14126 387 aaKnown RBP8.04□□□□□ -1.12
SEC61YLR378C AFG1P32317 509 aa8.04□□□□□ -1.12
SEC61YLR378C MRPL39P36533 70 aa8.04□□□□□ -1.12
SEC61YLR378C TCM62P38228 572 aaKnown RBP8.04□□□□□ -1.12
SEC61YLR378C SOL3P38858 249 aa8.04□□□□□ -1.12
SEC61YLR378C OTU1P43558 301 aa8.04□□□□□ -1.12
SEC61YLR378C CTK2P46962 323 aa8.04□□□□□ -1.12
SEC61YLR378C LSM1P47017 172 aaKnown RBP8.04□□□□□ -1.12
SEC61YLR378C ARG5,6Q01217 863 aa8.04□□□□□ -1.12
SEC61YLR378C COQ11Q05892 277 aa8.04□□□□□ -1.12
SEC61YLR378C ERF2Q06551 359 aa8.04□□□□□ -1.12
SEC61YLR378C RPL7BQ12213 244 aaKnown RBP8.04□□□□□ -1.12
SEC61YLR378C MCT1Q12283 360 aa8.04□□□□□ -1.12
SEC61YLR378C TDH3P00359 332 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
SEC61YLR378C URA3P03962 267 aa8.03□□□□□ -1.12
SEC61YLR378C STF2P16965 84 aa8.03□□□□□ -1.12
SEC61YLR378C RFA3P26755 122 aaKnown RBP8.03□□□□□ -1.12
SEC61YLR378C RRF1P38771 230 aa8.03□□□□□ -1.12
SEC61YLR378C BUD8P41698 603 aa8.03□□□□□ -1.12
SEC61YLR378C AVT4P50944 713 aa8.03□□□□□ -1.12
SEC61YLR378C YGL159WP53110 370 aa8.03□□□□□ -1.12
SEC61YLR378C SOK2P53438 785 aaPredicted RBP8.03□□□□□ -1.12
SEC61YLR378C YAP6Q03935 383 aa8.03□□□□□ -1.12
SEC61YLR378C THI72Q08579 599 aa8.03□□□□□ -1.12
SEC61YLR378C YOR385WQ08909 290 aa8.03□□□□□ -1.12
SEC61YLR378C TRM13Q12383 476 aa8.03□□□□□ -1.12
SEC61YLR378C YBL010CP32788 280 aa8.03□□□□□ -1.12
SEC61YLR378C PPZ2P33329 710 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms