RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C TDH2P00358 332 aaKnown RBP6.77□□□□□ -1.33
SNP1YIL061C YHR214C-DP0CX93 97 aa6.77□□□□□ -1.33
SNP1YIL061C KRR1P25586 316 aaPredicted RBP6.77□□□□□ -1.33
SNP1YIL061C ACB1P31787 87 aa6.77□□□□□ -1.33
SNP1YIL061C UBS1P38290 277 aa6.77□□□□□ -1.33
SNP1YIL061C GEP4P38812 185 aa6.77□□□□□ -1.33
SNP1YIL061C VMA7P39111 118 aa6.77□□□□□ -1.33
SNP1YIL061C LSM1P47017 172 aaKnown RBP6.77□□□□□ -1.33
SNP1YIL061C TYW3P53177 273 aa6.77□□□□□ -1.33
SNP1YIL061C MDM30Q05930 598 aa6.77□□□□□ -1.33
SNP1YIL061C CTS2Q06350 511 aa6.77□□□□□ -1.33
SNP1YIL061C GLT1Q12680 2145 aaKnown RBP6.77□□□□□ -1.33
SNP1YIL061C NAM9P27929 486 aa6.76□□□□□ -1.33
SNP1YIL061C MRP17P28778 131 aa6.76□□□□□ -1.33
SNP1YIL061C MRPL27P36526 146 aaPredicted RBP6.76□□□□□ -1.33
SNP1YIL061C GRE3P38715 327 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
SNP1YIL061C SLZ1P40167 298 aa6.76□□□□□ -1.33
SNP1YIL061C TIR3P40552 269 aa6.76□□□□□ -1.33
SNP1YIL061C MSY1P48527 492 aa6.76□□□□□ -1.33
SNP1YIL061C BXI1P48558 297 aa6.76□□□□□ -1.33
SNP1YIL061C RSM27P53305 110 aa6.76□□□□□ -1.33
SNP1YIL061C BSC5P53755 489 aa6.76□□□□□ -1.33
SNP1YIL061C AAH1P53909 347 aa6.76□□□□□ -1.33
SNP1YIL061C SMX3P54999 86 aaPredicted RBP6.76□□□□□ -1.33
SNP1YIL061C PRM15Q03262 622 aa6.76□□□□□ -1.33
SNP1YIL061C YMR265CQ03508 461 aaKnown RBP6.76□□□□□ -1.33
SNP1YIL061C RVB1Q03940 463 aaKnown RBP6.76□□□□□ -1.33
SNP1YIL061C DFG5Q05031 458 aa6.76□□□□□ -1.33
SNP1YIL061C YRM1Q12340 786 aa6.76□□□□□ -1.33
SNP1YIL061C TRM13Q12383 476 aa6.76□□□□□ -1.33
SNP1YIL061C RRI1Q12468 440 aa6.76□□□□□ -1.33
SNP1YIL061C SGA1P08019 549 aa6.75□□□□□ -1.33
SNP1YIL061C URA6P15700 204 aa6.75□□□□□ -1.33
SNP1YIL061C PDX1P16451 410 aa6.75□□□□□ -1.33
SNP1YIL061C SPO7P18410 259 aa6.75□□□□□ -1.33
SNP1YIL061C HXT2P23585 541 aa6.75□□□□□ -1.33
SNP1YIL061C ERG8P24521 451 aa6.75□□□□□ -1.33
SNP1YIL061C CPR4P25334 318 aa6.75□□□□□ -1.33
SNP1YIL061C YCR016WP25617 290 aaKnown RBP6.75□□□□□ -1.33
SNP1YIL061C AIM3P38266 947 aaKnown RBP6.75□□□□□ -1.33
SNP1YIL061C UMP1P38293 148 aa6.75□□□□□ -1.33
SNP1YIL061C OM14P38325 134 aa6.75□□□□□ -1.33
SNP1YIL061C LEU5P38702 357 aa6.75□□□□□ -1.33
SNP1YIL061C SHO1P40073 367 aa6.75□□□□□ -1.33
SNP1YIL061C REE1P40893 198 aa6.75□□□□□ -1.33
SNP1YIL061C NIT2P47016 307 aa6.75□□□□□ -1.33
SNP1YIL061C PMT3P47190 753 aa6.75□□□□□ -1.33
SNP1YIL061C NIT3P49954 291 aa6.75□□□□□ -1.33
SNP1YIL061C PCP1P53259 346 aa6.75□□□□□ -1.33
SNP1YIL061C GTF1P53260 183 aaPredicted RBP6.75□□□□□ -1.33
SNP1YIL061C LAP3Q01532 483 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
SNP1YIL061C SDC1Q03323 175 aa6.75□□□□□ -1.33
SNP1YIL061C YDR102CQ03864 110 aa6.75□□□□□ -1.33
SNP1YIL061C YPL272CQ08984 517 aa6.75□□□□□ -1.33
SNP1YIL061C ATG31Q12421 196 aa6.75□□□□□ -1.33
SNP1YIL061C PHO2P07269 559 aa6.74□□□□□ -1.33
SNP1YIL061C DSF1P0CX08 502 aa6.74□□□□□ -1.33
SNP1YIL061C YNR073CP0CX09 502 aa6.74□□□□□ -1.33
SNP1YIL061C SEN2P16658 377 aa6.74□□□□□ -1.33
SNP1YIL061C HNM1P19807 563 aa6.74□□□□□ -1.33
SNP1YIL061C ARO4P32449 370 aaKnown RBP6.74□□□□□ -1.33
SNP1YIL061C AIM46P38885 310 aa6.74□□□□□ -1.33
SNP1YIL061C PTI1P39927 425 aaPredicted RBP6.74□□□□□ -1.33
SNP1YIL061C PDR16P53860 351 aaKnown RBP6.74□□□□□ -1.33
SNP1YIL061C GIM3P53900 129 aa6.74□□□□□ -1.33
SNP1YIL061C ARG5,6Q01217 863 aa6.74□□□□□ -1.33
SNP1YIL061C KAP120Q02932 1032 aa6.74□□□□□ -1.33
SNP1YIL061C HNT1Q04344 158 aaKnown RBP6.74□□□□□ -1.33
SNP1YIL061C SRL2Q12020 392 aa6.74□□□□□ -1.33
SNP1YIL061C PIN2Q12057 282 aa6.74□□□□□ -1.33
SNP1YIL061C MCT1Q12283 360 aa6.74□□□□□ -1.33
SNP1YIL061C YGL194C-AQ2V2P6 80 aa6.74□□□□□ -1.33
SNP1YIL061C TOR1P35169 2470 aa6.74□□□□□ -1.33
SNP1YIL061C FLO9P39712 1322 aa6.74□□□□□ -1.33
SNP1YIL061C NUM1Q00402 2748 aa6.73□□□□□ -1.33
SNP1YIL061C CDC34P14682 295 aa6.73□□□□□ -1.33
SNP1YIL061C MDH2P22133 377 aa6.73□□□□□ -1.33
SNP1YIL061C ADH7P25377 361 aa6.73□□□□□ -1.33
SNP1YIL061C FMT1P32785 401 aa6.73□□□□□ -1.33
SNP1YIL061C SWM2P40342 146 aa6.73□□□□□ -1.33
SNP1YIL061C CIN2P46670 268 aa6.73□□□□□ -1.33
SNP1YIL061C LOH1P47055 219 aa6.73□□□□□ -1.33
SNP1YIL061C NRK1P53915 240 aa6.73□□□□□ -1.33
SNP1YIL061C HHT1P61830 136 aa6.73□□□□□ -1.33
SNP1YIL061C DLT1Q04216 342 aa6.73□□□□□ -1.33
SNP1YIL061C MIX14Q04341 121 aa6.73□□□□□ -1.33
SNP1YIL061C ISA2Q12425 185 aa6.73□□□□□ -1.33
SNP1YIL061C IRA1P18963 3092 aa6.72□□□□□ -1.33
SNP1YIL061C CDC36P06100 191 aaPredicted RBP6.72□□□□□ -1.33
SNP1YIL061C NAM2P11325 894 aa6.72□□□□□ -1.33
SNP1YIL061C STE4P18851 423 aa6.72□□□□□ -1.33
SNP1YIL061C PCL1P24867 279 aa6.72□□□□□ -1.33
SNP1YIL061C YCR061WP25639 631 aa6.72□□□□□ -1.33
SNP1YIL061C TRR1P29509 319 aaKnown RBP6.72□□□□□ -1.33
SNP1YIL061C VMA5P31412 392 aaKnown RBP6.72□□□□□ -1.33
SNP1YIL061C MTC7P32633 139 aa6.72□□□□□ -1.33
SNP1YIL061C PPZ2P33329 710 aa6.72□□□□□ -1.33
SNP1YIL061C SOF1P33750 489 aaKnown RBP6.72□□□□□ -1.33
SNP1YIL061C APD1P38281 316 aa6.72□□□□□ -1.33
SNP1YIL061C YPC1P38298 316 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms