RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W DDI1P40087 428 aa4.04□□□□□ -1.76
NMD3YHR170W YJL218WP40892 196 aaKnown RBP4.04□□□□□ -1.76
NMD3YHR170W YGR149WP48236 432 aa4.04□□□□□ -1.76
NMD3YHR170W COS10P52924 374 aa4.04□□□□□ -1.76
NMD3YHR170W IMO32P53219 342 aa4.04□□□□□ -1.76
NMD3YHR170W VOA1P53262 265 aa4.04□□□□□ -1.76
NMD3YHR170W MAL12P53341 584 aa4.04□□□□□ -1.76
NMD3YHR170W SNX41Q04053 625 aa4.04□□□□□ -1.76
NMD3YHR170W YMR252CQ04814 134 aa4.04□□□□□ -1.76
NMD3YHR170W MSC3Q05812 728 aa4.04□□□□□ -1.76
NMD3YHR170W YOR376WQ08900 122 aa4.04□□□□□ -1.76
NMD3YHR170W THP3Q12049 470 aaKnown RBP4.04□□□□□ -1.76
NMD3YHR170W AEP3Q12089 606 aa4.04□□□□□ -1.76
NMD3YHR170W YDL109CQ12103 647 aa4.04□□□□□ -1.76
NMD3YHR170W MCP1Q12106 302 aa4.04□□□□□ -1.76
NMD3YHR170W MED2Q12124 431 aa4.04□□□□□ -1.76
NMD3YHR170W YRA1Q12159 226 aaKnown RBP4.04□□□□□ -1.76
NMD3YHR170W APC2Q12440 853 aa4.04□□□□□ -1.76
NMD3YHR170W DCP1Q12517 231 aaPredicted RBP4.04□□□□□ -1.76
NMD3YHR170W NFT1P0CE68 1218 aa4.03□□□□□ -1.76
NMD3YHR170W RPL40AP0CH08 128 aaKnown RBP4.03□□□□□ -1.76
NMD3YHR170W RPL40BP0CH09 128 aaKnown RBP4.03□□□□□ -1.76
NMD3YHR170W SPO7P18410 259 aa4.03□□□□□ -1.76
NMD3YHR170W PHO80P20052 293 aa4.03□□□□□ -1.76
NMD3YHR170W YCR061WP25639 631 aa4.03□□□□□ -1.76
NMD3YHR170W HMX1P32339 317 aa4.03□□□□□ -1.76
NMD3YHR170W DOA4P32571 926 aa4.03□□□□□ -1.76
NMD3YHR170W SEC66P33754 206 aa4.03□□□□□ -1.76
NMD3YHR170W YKL071WP36086 256 aa4.03□□□□□ -1.76
NMD3YHR170W DTR1P38125 572 aa4.03□□□□□ -1.76
NMD3YHR170W NTC20P38302 140 aaPredicted RBP4.03□□□□□ -1.76
NMD3YHR170W OM14P38325 134 aa4.03□□□□□ -1.76
NMD3YHR170W LEU5P38702 357 aa4.03□□□□□ -1.76
NMD3YHR170W YHK8P38776 514 aa4.03□□□□□ -1.76
NMD3YHR170W FET3P38993 636 aa4.03□□□□□ -1.76
NMD3YHR170W PFS2P42841 465 aaKnown RBP4.03□□□□□ -1.76
NMD3YHR170W SAY1P53324 424 aa4.03□□□□□ -1.76
NMD3YHR170W MKC7P53379 596 aa4.03□□□□□ -1.76
NMD3YHR170W MNT4P53745 580 aa4.03□□□□□ -1.76
NMD3YHR170W GIS1Q03833 894 aa4.03□□□□□ -1.76
NMD3YHR170W YMR315WQ04869 349 aaKnown RBP4.03□□□□□ -1.76
NMD3YHR170W COX20Q04935 205 aa4.03□□□□□ -1.76
NMD3YHR170W MDM30Q05930 598 aa4.03□□□□□ -1.76
NMD3YHR170W RRG7Q08774 242 aaPredicted RBP4.03□□□□□ -1.76
NMD3YHR170W FRE3Q08905 711 aa4.03□□□□□ -1.76
NMD3YHR170W AKR2Q12013 749 aa4.03□□□□□ -1.76
NMD3YHR170W VPS63O13549 108 aa4.02□□□□□ -1.77
NMD3YHR170W TDH1P00360 332 aaKnown RBP4.02□□□□□ -1.77
NMD3YHR170W YPT1P01123 206 aaKnown RBP4.02□□□□□ -1.77
NMD3YHR170W SIR2P06700 562 aa4.02□□□□□ -1.77
NMD3YHR170W RIP1P08067 215 aa4.02□□□□□ -1.77
NMD3YHR170W BOS1P25385 244 aa4.02□□□□□ -1.77
NMD3YHR170W PAD1P33751 242 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
NMD3YHR170W ZRT3P34240 503 aa4.02□□□□□ -1.77
NMD3YHR170W YBR137WP38276 179 aa4.02□□□□□ -1.77
NMD3YHR170W GRE3P38715 327 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
NMD3YHR170W PHO90P39535 881 aa4.02□□□□□ -1.77
NMD3YHR170W RPE1P46969 238 aa4.02□□□□□ -1.77
NMD3YHR170W SFH5P47008 294 aa4.02□□□□□ -1.77
NMD3YHR170W YAE1P47118 141 aaPredicted RBP4.02□□□□□ -1.77
NMD3YHR170W RMD9P53140 646 aaKnown RBP4.02□□□□□ -1.77
NMD3YHR170W MRH4P53166 561 aa4.02□□□□□ -1.77
NMD3YHR170W ASI3P53983 676 aa4.02□□□□□ -1.77
NMD3YHR170W NUP53Q03790 475 aa4.02□□□□□ -1.77
NMD3YHR170W NMA1Q06178 401 aaKnown RBP4.02□□□□□ -1.77
NMD3YHR170W SSK1Q07084 712 aa4.02□□□□□ -1.77
NMD3YHR170W COQ10Q08058 207 aa4.02□□□□□ -1.77
NMD3YHR170W TIR4Q12218 487 aaPredicted RBP4.02□□□□□ -1.77
NMD3YHR170W PRS5Q12265 496 aaKnown RBP4.02□□□□□ -1.77
NMD3YHR170W YOR343CQ12484 108 aa4.02□□□□□ -1.77
NMD3YHR170W YLR099W-AQ3E798 87 aa4.02□□□□□ -1.77
NMD3YHR170W PDE2P06776 526 aa4.02□□□□□ -1.77
NMD3YHR170W NUP1P20676 1076 aa4.02□□□□□ -1.77
NMD3YHR170W NAM9P27929 486 aa4.02□□□□□ -1.77
NMD3YHR170W PPA2P28239 310 aa4.02□□□□□ -1.77
NMD3YHR170W FUN26P31381 517 aa4.02□□□□□ -1.77
NMD3YHR170W PDR3P33200 976 aa4.02□□□□□ -1.77
NMD3YHR170W GPX1P36014 167 aa4.02□□□□□ -1.77
NMD3YHR170W RSM22P36056 628 aa4.02□□□□□ -1.77
NMD3YHR170W YBR063CP38083 404 aa4.02□□□□□ -1.77
NMD3YHR170W CHK1P38147 527 aa4.02□□□□□ -1.77
NMD3YHR170W FMP23P38231 175 aa4.02□□□□□ -1.77
NMD3YHR170W LNP1P38878 278 aa4.02□□□□□ -1.77
NMD3YHR170W MLH1P38920 769 aa4.02□□□□□ -1.77
NMD3YHR170W IKS1P47042 667 aa4.02□□□□□ -1.77
NMD3YHR170W PGU1P47180 361 aa4.02□□□□□ -1.77
NMD3YHR170W YGL117WP53133 265 aa4.02□□□□□ -1.77
NMD3YHR170W PNC1P53184 216 aaKnown RBP4.02□□□□□ -1.77
NMD3YHR170W MPP6P53725 186 aaPredicted RBP4.02□□□□□ -1.77
NMD3YHR170W MSS11Q03825 758 aa4.02□□□□□ -1.77
NMD3YHR170W YMR130WQ04223 302 aa4.02□□□□□ -1.77
NMD3YHR170W DCR2Q05924 578 aa4.02□□□□□ -1.77
NMD3YHR170W IPK1Q06667 281 aa4.02□□□□□ -1.77
NMD3YHR170W YOS9Q99220 542 aa4.02□□□□□ -1.77
NMD3YHR170W RPS18AP0CX55 146 aaKnown RBP4.01□□□□□ -1.77
NMD3YHR170W RPS18BP0CX56 146 aaPredicted RBP4.01□□□□□ -1.77
NMD3YHR170W EXG1P23776 448 aaKnown RBP4.01□□□□□ -1.77
NMD3YHR170W ADH7P25377 361 aa4.01□□□□□ -1.77
NMD3YHR170W PUT3P25502 979 aaPredicted RBP4.01□□□□□ -1.77
NMD3YHR170W CDC39P25655 2108 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms