RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C JHD2P47156 728 aaPredicted RBP2.88□□□□□ -1.95
MSM1YGR171C CDH1P53197 566 aa2.88□□□□□ -1.95
MSM1YGR171C VHT1P53241 593 aa2.88□□□□□ -1.95
MSM1YGR171C FYV6P53913 173 aa2.88□□□□□ -1.95
MSM1YGR171C CTF19Q02732 369 aa2.88□□□□□ -1.95
MSM1YGR171C DPP1Q05521 289 aa2.88□□□□□ -1.95
MSM1YGR171C YLR177WQ06251 628 aa2.88□□□□□ -1.95
MSM1YGR171C NOT5Q12514 560 aaPredicted RBP2.88□□□□□ -1.95
MSM1YGR171C YDR157WA0A023PZE8 133 aa2.88□□□□□ -1.95
MSM1YGR171C CDC50P25656 391 aa2.88□□□□□ -1.95
MSM1YGR171C SGE1P33335 543 aa2.88□□□□□ -1.95
MSM1YGR171C YKL187CP34231 750 aa2.88□□□□□ -1.95
MSM1YGR171C JEN1P36035 616 aa2.88□□□□□ -1.95
MSM1YGR171C SWD3P38123 315 aa2.88□□□□□ -1.95
MSM1YGR171C MRP21P38175 177 aa2.88□□□□□ -1.95
MSM1YGR171C WSC4P38739 605 aa2.88□□□□□ -1.95
MSM1YGR171C YER184CP39961 794 aa2.88□□□□□ -1.95
MSM1YGR171C IRC18P47056 224 aa2.88□□□□□ -1.95
MSM1YGR171C YJR149WP47177 404 aa2.88□□□□□ -1.95
MSM1YGR171C NUP57P48837 541 aa2.88□□□□□ -1.95
MSM1YGR171C PRP24P49960 444 aaKnown RBP2.88□□□□□ -1.95
MSM1YGR171C YGL039WP53183 348 aaKnown RBP2.88□□□□□ -1.95
MSM1YGR171C GMC1Q04399 608 aa2.88□□□□□ -1.95
MSM1YGR171C SPC24Q04477 213 aa2.88□□□□□ -1.95
MSM1YGR171C YLR446WQ06204 433 aa2.88□□□□□ -1.95
MSM1YGR171C YPL245WQ12179 454 aaKnown RBP2.88□□□□□ -1.95
MSM1YGR171C HRT3Q12347 344 aa2.88□□□□□ -1.95
MSM1YGR171C YPL119C-AQ3E751 87 aa2.88□□□□□ -1.95
MSM1YGR171C MHP1P43638 1398 aa2.87□□□□□ -1.95
MSM1YGR171C ECM5Q03214 1411 aa2.87□□□□□ -1.95
MSM1YGR171C YAL064W-BO13512 126 aa2.87□□□□□ -1.95
MSM1YGR171C SNA3P14359 133 aa2.87□□□□□ -1.95
MSM1YGR171C ISY1P21374 235 aaPredicted RBP2.87□□□□□ -1.95
MSM1YGR171C TRR1P29509 319 aaKnown RBP2.87□□□□□ -1.95
MSM1YGR171C PRX1P34227 261 aaKnown RBP2.87□□□□□ -1.95
MSM1YGR171C SOL2P37262 315 aa2.87□□□□□ -1.95
MSM1YGR171C YBR241CP38142 488 aa2.87□□□□□ -1.95
MSM1YGR171C VMA22P38784 181 aa2.87□□□□□ -1.95
MSM1YGR171C TIM17P39515 158 aa2.87□□□□□ -1.95
MSM1YGR171C YJR054WP47114 497 aa2.87□□□□□ -1.95
MSM1YGR171C YJR141WP47172 347 aaPredicted RBP2.87□□□□□ -1.95
MSM1YGR171C MGA1P53050 456 aa2.87□□□□□ -1.95
MSM1YGR171C PAL1Q05518 499 aaKnown RBP2.87□□□□□ -1.95
MSM1YGR171C FAR10Q06001 478 aa2.87□□□□□ -1.95
MSM1YGR171C LIP2Q06005 328 aa2.87□□□□□ -1.95
MSM1YGR171C PEX30Q06169 523 aa2.87□□□□□ -1.95
MSM1YGR171C FIG1P38224 298 aa2.86□□□□□ -1.95
MSM1YGR171C AME1P38313 324 aa2.86□□□□□ -1.95
MSM1YGR171C OM14P38325 134 aa2.86□□□□□ -1.95
MSM1YGR171C CHL4P38907 458 aa2.86□□□□□ -1.95
MSM1YGR171C VAB2P40003 282 aa2.86□□□□□ -1.95
MSM1YGR171C KRE29P40026 464 aa2.86□□□□□ -1.95
MSM1YGR171C BMT5P40493 336 aa2.86□□□□□ -1.95
MSM1YGR171C GAB1P41733 394 aa2.86□□□□□ -1.95
MSM1YGR171C LSM1P47017 172 aaKnown RBP2.86□□□□□ -1.95
MSM1YGR171C YPS5P53057 165 aa2.86□□□□□ -1.95
MSM1YGR171C BRR6P53062 197 aa2.86□□□□□ -1.95
MSM1YGR171C SDT1P53078 280 aa2.86□□□□□ -1.95
MSM1YGR171C YGR015CP53208 328 aa2.86□□□□□ -1.95
MSM1YGR171C NRM1P53718 249 aa2.86□□□□□ -1.95
MSM1YGR171C RNY1Q02933 434 aaKnown RBP2.86□□□□□ -1.95
MSM1YGR171C YMR114CQ04471 368 aaKnown RBP2.86□□□□□ -1.95
MSM1YGR171C WTM1Q12363 437 aaKnown RBP2.86□□□□□ -1.95
MSM1YGR171C RPL21BQ12672 160 aaKnown RBP2.86□□□□□ -1.95
MSM1YGR171C SPT3P06844 337 aa2.85□□□□□ -1.95
MSM1YGR171C BCY1P07278 416 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C MRPL20P22354 195 aaPredicted RBP2.85□□□□□ -1.95
MSM1YGR171C YEL045CP32616 141 aa2.85□□□□□ -1.95
MSM1YGR171C CDC13P32797 924 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C SRP102P36057 244 aaPredicted RBP2.85□□□□□ -1.95
MSM1YGR171C MRPL39P36533 70 aa2.85□□□□□ -1.95
MSM1YGR171C YHR127WP38833 243 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C PET8P38921 284 aa2.85□□□□□ -1.95
MSM1YGR171C SEO1P39709 593 aa2.85□□□□□ -1.95
MSM1YGR171C EDC3P39998 551 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C GIM4P40005 111 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C YER137CP40083 148 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C ICE2P40499 491 aa2.85□□□□□ -1.95
MSM1YGR171C NIF3P53081 288 aa2.85□□□□□ -1.95
MSM1YGR171C MMS2P53152 137 aa2.85□□□□□ -1.95
MSM1YGR171C TPC1P53257 314 aa2.85□□□□□ -1.95
MSM1YGR171C GTR2P53290 341 aa2.85□□□□□ -1.95
MSM1YGR171C SCS7Q03529 384 aa2.85□□□□□ -1.95
MSM1YGR171C YML018CQ03730 393 aa2.85□□□□□ -1.95
MSM1YGR171C INM2Q05533 292 aa2.85□□□□□ -1.95
MSM1YGR171C TAZ1Q06510 381 aa2.85□□□□□ -1.95
MSM1YGR171C RPN8Q08723 338 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C YCL012CQ8J0M4 134 aa2.85□□□□□ -1.95
MSM1YGR171C YMR316C-AI2HB70 103 aa2.85□□□□□ -1.95
MSM1YGR171C TPI1P00942 248 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C ZWF1P11412 505 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C CAM1P29547 415 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C CPR5P35176 225 aa2.85□□□□□ -1.95
MSM1YGR171C RCK1P38622 512 aa2.85□□□□□ -1.95
MSM1YGR171C YMR144WP40214 342 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C STB1P42845 420 aa2.85□□□□□ -1.95
MSM1YGR171C ALB1P47019 175 aaPredicted RBP2.85□□□□□ -1.95
MSM1YGR171C TPN1P53099 579 aa2.85□□□□□ -1.95
MSM1YGR171C RNH201P53942 307 aa2.85□□□□□ -1.95
MSM1YGR171C YNL040WP53960 456 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms