RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W SEC10Q06245 871 aa0.69□□□□□ -2.3
CUL3YGR003W YOR283WQ12040 230 aaKnown RBP0.69□□□□□ -2.3
CUL3YGR003W RPL4AP10664 362 aaKnown RBP0.69□□□□□ -2.3
CUL3YGR003W PEX3P28795 441 aa0.69□□□□□ -2.3
CUL3YGR003W CAM1P29547 415 aaKnown RBP0.69□□□□□ -2.3
CUL3YGR003W SFC1P33303 322 aa0.69□□□□□ -2.3
CUL3YGR003W YOR062CP36025 268 aa0.69□□□□□ -2.3
CUL3YGR003W NPT1P39683 429 aaKnown RBP0.69□□□□□ -2.3
CUL3YGR003W AGX1P43567 385 aa0.69□□□□□ -2.3
CUL3YGR003W YJL016WP47072 561 aa0.69□□□□□ -2.3
CUL3YGR003W RPL4BP49626 362 aaKnown RBP0.69□□□□□ -2.3
CUL3YGR003W GPN3Q06543 272 aa0.69□□□□□ -2.3
CUL3YGR003W YPR011CQ12251 326 aa0.69□□□□□ -2.3
CUL3YGR003W YOS9Q99220 542 aa0.69□□□□□ -2.3
CUL3YGR003W YEL009C-AA0A023PZF2 135 aa0.68□□□□□ -2.3
CUL3YGR003W SGA1P08019 549 aa0.68□□□□□ -2.3
CUL3YGR003W YSR3P23501 404 aa0.68□□□□□ -2.3
CUL3YGR003W CTR2P38865 189 aa0.68□□□□□ -2.3
CUL3YGR003W COA1P40452 197 aa0.68□□□□□ -2.3
CUL3YGR003W MRPL49P40858 161 aaPredicted RBP0.68□□□□□ -2.3
CUL3YGR003W KEL2P50090 882 aa0.68□□□□□ -2.3
CUL3YGR003W BOP2Q06150 570 aa0.68□□□□□ -2.3
CUL3YGR003W ICL1P28240 557 aaPredicted RBP0.68□□□□□ -2.3
CUL3YGR003W BMH1P29311 267 aaKnown RBP0.68□□□□□ -2.3
CUL3YGR003W DOA4P32571 926 aa0.68□□□□□ -2.3
CUL3YGR003W MNT4P53745 580 aa0.68□□□□□ -2.3
CUL3YGR003W SPP2Q02521 185 aa0.68□□□□□ -2.3
CUL3YGR003W SPO77Q06134 477 aa0.68□□□□□ -2.3
CUL3YGR003W YLR179CQ06252 201 aaKnown RBP0.68□□□□□ -2.3
CUL3YGR003W BCP1Q06338 283 aa0.68□□□□□ -2.3
CUL3YGR003W YLR413WQ06689 675 aa0.68□□□□□ -2.3
CUL3YGR003W SMT3Q12306 101 aaKnown RBP0.68□□□□□ -2.3
CUL3YGR003W SKI2P35207 1287 aaKnown RBP RIP-Chip data0.67□□□□□ -2.3not detected
CUL3YGR003W MAL32P38158 584 aa0.67□□□□□ -2.3
CUL3YGR003W PRM9P39551 298 aa0.67□□□□□ -2.3
CUL3YGR003W MAL13P53338 473 aa0.67□□□□□ -2.3
CUL3YGR003W MAL12P53341 584 aa0.67□□□□□ -2.3
CUL3YGR003W CTF19Q02732 369 aa0.67□□□□□ -2.3
CUL3YGR003W EBS1Q03466 884 aaKnown RBP0.67□□□□□ -2.3
CUL3YGR003W PEX12Q04370 399 aa0.67□□□□□ -2.3
CUL3YGR003W EMC6Q12431 108 aa0.67□□□□□ -2.3
CUL3YGR003W HSM3P38348 480 aa0.66□□□□□ -2.3
CUL3YGR003W RRF1P38771 230 aa0.66□□□□□ -2.3
CUL3YGR003W RCY1P39531 840 aa0.66□□□□□ -2.3
CUL3YGR003W LSM4P40070 187 aaKnown RBP0.66□□□□□ -2.3
CUL3YGR003W TIF34P40217 347 aaKnown RBP0.66□□□□□ -2.3
CUL3YGR003W ERV25P54837 211 aaKnown RBP0.66□□□□□ -2.3
CUL3YGR003W SWI1P09547 1314 aa0.66□□□□□ -2.3
CUL3YGR003W YHR032W-AP0C5N6 59 aa0.66□□□□□ -2.3
CUL3YGR003W RNP1P32385 249 aa0.66□□□□□ -2.3
CUL3YGR003W PRS4P38063 326 aaPredicted RBP0.66□□□□□ -2.3
CUL3YGR003W YHL026CP38740 315 aa0.66□□□□□ -2.3
CUL3YGR003W YHI9P38765 294 aa0.66□□□□□ -2.3
CUL3YGR003W TDA11P38854 504 aa0.66□□□□□ -2.3
CUL3YGR003W TEM1P38987 245 aa0.66□□□□□ -2.3
CUL3YGR003W SNX4P47057 423 aa0.66□□□□□ -2.3
CUL3YGR003W AAH1P53909 347 aa0.66□□□□□ -2.3
CUL3YGR003W OST6Q03723 332 aa0.66□□□□□ -2.3
CUL3YGR003W TY3A-GQ12173 290 aa0.66□□□□□ -2.3
CUL3YGR003W TY3A-IQ99219 290 aa0.66□□□□□ -2.3
CUL3YGR003W STH1P32597 1359 aa0.66□□□□□ -2.3
CUL3YGR003W ADH3P07246 375 aaKnown RBP0.65□□□□□ -2.3
CUL3YGR003W SEC22P22214 214 aa0.65□□□□□ -2.3
CUL3YGR003W TAD2P47058 250 aa0.65□□□□□ -2.3
CUL3YGR003W EMP46Q12396 444 aa0.65□□□□□ -2.3
CUL3YGR003W QRI5P32344 111 aa0.65□□□□□ -2.31
CUL3YGR003W SCM4P32564 187 aa0.65□□□□□ -2.31
CUL3YGR003W YBR096WP38256 230 aa0.65□□□□□ -2.31
CUL3YGR003W YFR054CP43622 192 aa0.65□□□□□ -2.31
CUL3YGR003W YJL118WP47022 219 aa0.65□□□□□ -2.31
CUL3YGR003W CTR3Q06686 241 aa0.65□□□□□ -2.31
CUL3YGR003W PER33Q12144 273 aa0.65□□□□□ -2.31
CUL3YGR003W SME1Q12330 94 aaPredicted RBP0.65□□□□□ -2.31
CUL3YGR003W PST1Q12355 444 aa0.65□□□□□ -2.31
CUL3YGR003W SAS5Q99314 248 aa0.65□□□□□ -2.31
CUL3YGR003W COX2P00410 251 aa0.64□□□□□ -2.31
CUL3YGR003W MET16P18408 261 aaPredicted RBP0.64□□□□□ -2.31
CUL3YGR003W SMB1P40018 196 aaKnown RBP0.64□□□□□ -2.31
CUL3YGR003W YPL119C-AQ3E751 87 aa0.64□□□□□ -2.31
CUL3YGR003W YPL229WQ99395 206 aa0.64□□□□□ -2.31
CUL3YGR003W CYR1P08678 2026 aaKnown RBP0.64□□□□□ -2.31
CUL3YGR003W SSA3P09435 649 aaKnown RBP0.64□□□□□ -2.31
CUL3YGR003W POL30P15873 258 aaKnown RBP0.64□□□□□ -2.31
CUL3YGR003W DRE2P36152 348 aa0.64□□□□□ -2.31
CUL3YGR003W MSA2P36157 363 aa0.64□□□□□ -2.31
CUL3YGR003W DSN1P40568 576 aa0.64□□□□□ -2.31
CUL3YGR003W TIM21P53220 239 aa0.64□□□□□ -2.31
CUL3YGR003W COX20Q04935 205 aa0.64□□□□□ -2.31
CUL3YGR003W PEX10Q05568 337 aa0.64□□□□□ -2.31
CUL3YGR003W YBL008W-AQ3E821 79 aa0.64□□□□□ -2.31
CUL3YGR003W COX5AP00424 153 aa0.63□□□□□ -2.31
CUL3YGR003W RCN1P36054 211 aa0.63□□□□□ -2.31
CUL3YGR003W GLG2P47011 380 aa0.63□□□□□ -2.31
CUL3YGR003W SLX9P53251 210 aaPredicted RBP0.63□□□□□ -2.31
CUL3YGR003W ARP5P53946 755 aa0.63□□□□□ -2.31
CUL3YGR003W COQ10Q08058 207 aa0.63□□□□□ -2.31
CUL3YGR003W BBP1Q12365 385 aa0.63□□□□□ -2.31
CUL3YGR003W CCA1P21269 546 aa0.62□□□□□ -2.31
CUL3YGR003W SPT8P38915 602 aa0.62□□□□□ -2.31
CUL3YGR003W SNZ3P43545 298 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms