RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W FRE5Q08908 694 aa4.35□□□□□ -1.71
RPN12YFR052W ENA1P13587 1091 aa4.34□□□□□ -1.71
RPN12YFR052W RPA135P22138 1203 aaKnown RBP4.34□□□□□ -1.71
RPN12YFR052W FUN19P28003 413 aaPredicted RBP4.34□□□□□ -1.71
RPN12YFR052W CLB6P32943 380 aa4.34□□□□□ -1.71
RPN12YFR052W YKR015CP36111 568 aa4.34□□□□□ -1.71
RPN12YFR052W FLX1P40464 311 aa4.34□□□□□ -1.71
RPN12YFR052W MSS2P40990 351 aa4.34□□□□□ -1.71
RPN12YFR052W LOH1P47055 219 aa4.34□□□□□ -1.71
RPN12YFR052W MNT4P53745 580 aa4.34□□□□□ -1.71
RPN12YFR052W SED1Q01589 338 aa4.34□□□□□ -1.71
RPN12YFR052W ENA2Q01896 1091 aa4.34□□□□□ -1.71
RPN12YFR052W YLR173WQ06247 608 aa4.34□□□□□ -1.71
RPN12YFR052W ENA5Q12691 1091 aa4.34□□□□□ -1.71
RPN12YFR052W MED11Q99278 115 aa4.34□□□□□ -1.71
RPN12YFR052W Q0297Q9ZZV8 51 aa4.34□□□□□ -1.71
RPN12YFR052W MES1P00958 751 aaKnown RBP4.33□□□□□ -1.72
RPN12YFR052W MET17P06106 444 aa4.33□□□□□ -1.72
RPN12YFR052W PUT3P25502 979 aaPredicted RBP4.33□□□□□ -1.72
RPN12YFR052W DAL80P26343 269 aa4.33□□□□□ -1.72
RPN12YFR052W GLC7P32598 312 aaKnown RBP4.33□□□□□ -1.72
RPN12YFR052W SUR1P33300 382 aa4.33□□□□□ -1.72
RPN12YFR052W ECT1P33412 323 aa4.33□□□□□ -1.72
RPN12YFR052W MIA40P36046 403 aa4.33□□□□□ -1.72
RPN12YFR052W SDS22P36047 338 aa4.33□□□□□ -1.72
RPN12YFR052W YPK3P38070 525 aa4.33□□□□□ -1.72
RPN12YFR052W THI2P38141 450 aa4.33□□□□□ -1.72
RPN12YFR052W YLF2P38746 405 aa4.33□□□□□ -1.72
RPN12YFR052W ECM14P38836 430 aa4.33□□□□□ -1.72
RPN12YFR052W GVP36P40531 326 aaKnown RBP4.33□□□□□ -1.72
RPN12YFR052W YIL012WP40551 113 aa4.33□□□□□ -1.72
RPN12YFR052W CIN2P46670 268 aa4.33□□□□□ -1.72
RPN12YFR052W SAM50P53969 484 aa4.33□□□□□ -1.72
RPN12YFR052W YML122CQ03207 126 aa4.33□□□□□ -1.72
RPN12YFR052W ARP10Q04549 284 aa4.33□□□□□ -1.72
RPN12YFR052W YMR252CQ04814 134 aa4.33□□□□□ -1.72
RPN12YFR052W GAT3Q07928 141 aa4.33□□□□□ -1.72
RPN12YFR052W THP3Q12049 470 aaKnown RBP4.33□□□□□ -1.72
RPN12YFR052W TRM10Q12400 293 aa4.33□□□□□ -1.72
RPN12YFR052W RRI1Q12468 440 aa4.33□□□□□ -1.72
RPN12YFR052W HBN1Q96VH4 193 aa4.33□□□□□ -1.72
RPN12YFR052W SCEIP03882 235 aa4.32□□□□□ -1.72
RPN12YFR052W DSF1P0CX08 502 aa4.32□□□□□ -1.72
RPN12YFR052W YNR073CP0CX09 502 aa4.32□□□□□ -1.72
RPN12YFR052W MDH1P17505 334 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
RPN12YFR052W ANR2P36090 516 aaPredicted RBP4.32□□□□□ -1.72
RPN12YFR052W APL3P38065 1025 aa4.32□□□□□ -1.72
RPN12YFR052W PEX32P38292 413 aa4.32□□□□□ -1.72
RPN12YFR052W MSS4P38994 779 aa4.32□□□□□ -1.72
RPN12YFR052W URM1P40554 99 aaPredicted RBP4.32□□□□□ -1.72
RPN12YFR052W CTK2P46962 323 aa4.32□□□□□ -1.72
RPN12YFR052W YJL016WP47072 561 aa4.32□□□□□ -1.72
RPN12YFR052W GTF1P53260 183 aaPredicted RBP4.32□□□□□ -1.72
RPN12YFR052W TEX1P53851 422 aaKnown RBP4.32□□□□□ -1.72
RPN12YFR052W YMR279CQ03263 540 aa4.32□□□□□ -1.72
RPN12YFR052W MAK3Q03503 176 aa4.32□□□□□ -1.72
RPN12YFR052W YDR514CQ04408 483 aa4.32□□□□□ -1.72
RPN12YFR052W HLR1Q04429 423 aa4.32□□□□□ -1.72
RPN12YFR052W RNH1Q04740 348 aa4.32□□□□□ -1.72
RPN12YFR052W NMA1Q06178 401 aaKnown RBP4.32□□□□□ -1.72
RPN12YFR052W ASR1Q06834 288 aa4.32□□□□□ -1.72
RPN12YFR052W UTP20P35194 2493 aaKnown RBP4.31□□□□□ -1.72
RPN12YFR052W SGA1P08019 549 aa4.31□□□□□ -1.72
RPN12YFR052W ARO7P32178 256 aa4.31□□□□□ -1.72
RPN12YFR052W CLG1P35190 452 aa4.31□□□□□ -1.72
RPN12YFR052W YBR096WP38256 230 aa4.31□□□□□ -1.72
RPN12YFR052W LYS20P48570 428 aaKnown RBP4.31□□□□□ -1.72
RPN12YFR052W RSM23Q01163 450 aa4.31□□□□□ -1.72
RPN12YFR052W PRP3Q03338 469 aaPredicted RBP4.31□□□□□ -1.72
RPN12YFR052W DIG2Q03373 323 aaKnown RBP4.31□□□□□ -1.72
RPN12YFR052W MSS11Q03825 758 aa4.31□□□□□ -1.72
RPN12YFR052W SSK1Q07084 712 aa4.31□□□□□ -1.72
RPN12YFR052W PML1Q07930 204 aaPredicted RBP4.31□□□□□ -1.72
RPN12YFR052W RRS1Q08746 203 aaKnown RBP4.31□□□□□ -1.72
RPN12YFR052W SRL2Q12020 392 aa4.31□□□□□ -1.72
RPN12YFR052W LYS21Q12122 440 aaKnown RBP4.31□□□□□ -1.72
RPN12YFR052W RBD2Q12270 262 aa4.31□□□□□ -1.72
RPN12YFR052W YOL114CQ12322 202 aa4.31□□□□□ -1.72
RPN12YFR052W YPR071WQ12346 211 aa4.31□□□□□ -1.72
RPN12YFR052W NKP1Q12493 238 aa4.31□□□□□ -1.72
RPN12YFR052W URA2P07259 2214 aaKnown RBP4.3□□□□□ -1.72
RPN12YFR052W RPP2AP05319 106 aaKnown RBP4.3□□□□□ -1.72
RPN12YFR052W YGL041W-AP0C5N3 154 aa4.3□□□□□ -1.72
RPN12YFR052W ARO3P14843 370 aaKnown RBP4.3□□□□□ -1.72
RPN12YFR052W CLB2P24869 491 aa4.3□□□□□ -1.72
RPN12YFR052W FUN26P31381 517 aa4.3□□□□□ -1.72
RPN12YFR052W REC104P33323 182 aa4.3□□□□□ -1.72
RPN12YFR052W MCH2P36032 473 aa4.3□□□□□ -1.72
RPN12YFR052W RSM22P36056 628 aa4.3□□□□□ -1.72
RPN12YFR052W FRM2P37261 193 aa4.3□□□□□ -1.72
RPN12YFR052W NVJ1P38881 321 aa4.3□□□□□ -1.72
RPN12YFR052W YER121WP40076 114 aa4.3□□□□□ -1.72
RPN12YFR052W PUG1P40100 303 aa4.3□□□□□ -1.72
RPN12YFR052W OST1P41543 476 aaKnown RBP4.3□□□□□ -1.72
RPN12YFR052W PMT6P42934 759 aa4.3□□□□□ -1.72
RPN12YFR052W YJR120WP47157 116 aa4.3□□□□□ -1.72
RPN12YFR052W PHB2P50085 310 aa4.3□□□□□ -1.72
RPN12YFR052W YIP5P53108 310 aa4.3□□□□□ -1.72
RPN12YFR052W PAU12P53343 120 aa4.3□□□□□ -1.72
RPN12YFR052W AAH1P53909 347 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms