RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W BUD25P85052 153 aa6.02□□□□□ -1.45
PDA1YER178W MRPL35Q06678 367 aa6.02□□□□□ -1.45
PDA1YER178W YPR1Q12458 312 aa6.02□□□□□ -1.45
PDA1YER178W UTP20P35194 2493 aaKnown RBP6.01□□□□□ -1.45
PDA1YER178W MSI1P13712 422 aa6.01□□□□□ -1.45
PDA1YER178W RPL24BP24000 155 aaKnown RBP6.01□□□□□ -1.45
PDA1YER178W DOA4P32571 926 aa6.01□□□□□ -1.45
PDA1YER178W SHM2P37291 469 aaKnown RBP6.01□□□□□ -1.45
PDA1YER178W YBR096WP38256 230 aa6.01□□□□□ -1.45
PDA1YER178W PRS3P38689 320 aaKnown RBP6.01□□□□□ -1.45
PDA1YER178W AAD14P42884 376 aa6.01□□□□□ -1.45
PDA1YER178W YGL159WP53110 370 aa6.01□□□□□ -1.45
PDA1YER178W TEX1P53851 422 aaKnown RBP6.01□□□□□ -1.45
PDA1YER178W DMA2P53924 522 aa6.01□□□□□ -1.45
PDA1YER178W RSM23Q01163 450 aa6.01□□□□□ -1.45
PDA1YER178W YDR114CQ04597 100 aa6.01□□□□□ -1.45
PDA1YER178W GAL83Q04739 417 aa6.01□□□□□ -1.45
PDA1YER178W IES3Q12345 250 aa6.01□□□□□ -1.45
PDA1YER178W ORT1Q12375 292 aa6.01□□□□□ -1.45
PDA1YER178W URA2P07259 2214 aaKnown RBP6.01□□□□□ -1.45
PDA1YER178W YGL041W-AP0C5N3 154 aa6□□□□□ -1.45
PDA1YER178W CNE1P27825 502 aa6□□□□□ -1.45
PDA1YER178W AGA2P32781 87 aa6□□□□□ -1.45
PDA1YER178W MTH1P35198 433 aa6□□□□□ -1.45
PDA1YER178W GDS1P41913 522 aa6□□□□□ -1.45
PDA1YER178W PMT5P52867 743 aa6□□□□□ -1.45
PDA1YER178W DOC1P53068 250 aa6□□□□□ -1.45
PDA1YER178W TIM10P87108 93 aa6□□□□□ -1.45
PDA1YER178W RRP17Q04031 235 aaPredicted RBP6□□□□□ -1.45
PDA1YER178W DLT1Q04216 342 aa6□□□□□ -1.45
PDA1YER178W TSR2Q06672 205 aaKnown RBP6□□□□□ -1.45
PDA1YER178W YLR108CQ12259 485 aa6□□□□□ -1.45
PDA1YER178W TDH3P00359 332 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
PDA1YER178W RPL39P04650 51 aa5.99□□□□□ -1.45
PDA1YER178W FUR4P05316 633 aaKnown RBP5.99□□□□□ -1.45
PDA1YER178W SAG1P20840 650 aa5.99□□□□□ -1.45
PDA1YER178W PAU2P32612 120 aa5.99□□□□□ -1.45
PDA1YER178W REC114P32841 428 aa5.99□□□□□ -1.45
PDA1YER178W MRT4P33201 236 aaKnown RBP5.99□□□□□ -1.45
PDA1YER178W YKL107WP34251 309 aa5.99□□□□□ -1.45
PDA1YER178W MCH2P36032 473 aa5.99□□□□□ -1.45
PDA1YER178W GPX2P38143 162 aa5.99□□□□□ -1.45
PDA1YER178W TCM62P38228 572 aaKnown RBP5.99□□□□□ -1.45
PDA1YER178W CTR2P38865 189 aa5.99□□□□□ -1.45
PDA1YER178W RIO2P40160 425 aaKnown RBP5.99□□□□□ -1.45
PDA1YER178W GLR1P41921 483 aaKnown RBP5.99□□□□□ -1.45
PDA1YER178W EGT2P42835 1041 aa5.99□□□□□ -1.45
PDA1YER178W YJL016WP47072 561 aa5.99□□□□□ -1.45
PDA1YER178W CPR8P53728 308 aa5.99□□□□□ -1.45
PDA1YER178W RNH201P53942 307 aa5.99□□□□□ -1.45
PDA1YER178W CIK1Q01649 594 aa5.99□□□□□ -1.45
PDA1YER178W TPO3Q06451 622 aa5.99□□□□□ -1.45
PDA1YER178W FRE3Q08905 711 aa5.99□□□□□ -1.45
PDA1YER178W ATG41Q12048 136 aa5.99□□□□□ -1.45
PDA1YER178W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
PDA1YER178W RPS18AP0CX55 146 aaKnown RBP5.98□□□□□ -1.45
PDA1YER178W RPS18BP0CX56 146 aaPredicted RBP5.98□□□□□ -1.45
PDA1YER178W MNS1P32906 549 aa5.98□□□□□ -1.45
PDA1YER178W PPZ2P33329 710 aa5.98□□□□□ -1.45
PDA1YER178W SFK1P35735 353 aa5.98□□□□□ -1.45
PDA1YER178W SSH1P38353 490 aaKnown RBP5.98□□□□□ -1.45
PDA1YER178W YND1P40009 630 aa5.98□□□□□ -1.45
PDA1YER178W DDI1P40087 428 aa5.98□□□□□ -1.45
PDA1YER178W DLS1P40366 167 aa5.98□□□□□ -1.45
PDA1YER178W ERJ5P43613 295 aaPredicted RBP5.98□□□□□ -1.45
PDA1YER178W FMP48P53233 369 aa5.98□□□□□ -1.45
PDA1YER178W DIG2Q03373 323 aaKnown RBP5.98□□□□□ -1.45
PDA1YER178W ATG17Q06410 417 aa5.98□□□□□ -1.45
PDA1YER178W MCM21Q06675 368 aa5.98□□□□□ -1.45
PDA1YER178W MDM36Q06820 579 aa5.98□□□□□ -1.45
PDA1YER178W PML1Q07930 204 aaPredicted RBP5.98□□□□□ -1.45
PDA1YER178W YOR029WQ12243 111 aa5.98□□□□□ -1.45
PDA1YER178W HUT1Q12520 339 aa5.98□□□□□ -1.45
PDA1YER178W DYN1P36022 4092 aa5.97□□□□□ -1.45
PDA1YER178W HIS3P06633 220 aa5.97□□□□□ -1.45
PDA1YER178W RPS23AP0CX29 145 aaKnown RBP5.97□□□□□ -1.45
PDA1YER178W RPS23BP0CX30 145 aa5.97□□□□□ -1.45
PDA1YER178W MATALPHA1P0CY06 175 aa5.97□□□□□ -1.45
PDA1YER178W HMLALPHA1P0CY07 175 aa5.97□□□□□ -1.45
PDA1YER178W RPL30P14120 105 aaKnown RBP5.97□□□□□ -1.45
PDA1YER178W AHC2P25649 128 aa5.97□□□□□ -1.45
PDA1YER178W AFG1P32317 509 aa5.97□□□□□ -1.45
PDA1YER178W ARO4P32449 370 aaKnown RBP5.97□□□□□ -1.45
PDA1YER178W NCA3P46955 337 aa5.97□□□□□ -1.45
PDA1YER178W NSA1P53136 463 aaPredicted RBP5.97□□□□□ -1.45
PDA1YER178W POP6P53218 158 aa5.97□□□□□ -1.45
PDA1YER178W YNR048WP53740 393 aa5.97□□□□□ -1.45
PDA1YER178W FMP42Q04991 504 aa5.97□□□□□ -1.45
PDA1YER178W SRL2Q12020 392 aa5.97□□□□□ -1.45
PDA1YER178W RPL6BP05739 176 aaKnown RBP5.96□□□□□ -1.46
PDA1YER178W MET3P08536 511 aa5.96□□□□□ -1.46
PDA1YER178W HXT2P23585 541 aa5.96□□□□□ -1.46
PDA1YER178W YOX1P34161 385 aa5.96□□□□□ -1.46
PDA1YER178W FAT1P38225 669 aa5.96□□□□□ -1.46
PDA1YER178W YBR137WP38276 179 aa5.96□□□□□ -1.46
PDA1YER178W ARC40P38328 384 aaKnown RBP5.96□□□□□ -1.46
PDA1YER178W MRH4P53166 561 aa5.96□□□□□ -1.46
PDA1YER178W YDC1Q02896 317 aa5.96□□□□□ -1.46
PDA1YER178W RCF1Q03713 159 aa5.96□□□□□ -1.46
PDA1YER178W YPR196WQ06595 470 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms