RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	EGT2	P42835	1041 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	NCA3	P46955	337 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	MRM2	P53123	320 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	CRZ1	P53968	678 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	HXT11	P54862	567 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	YDR102C	Q03864	110 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	YMR130W	Q04223	302 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	URC2	Q04411	772 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	HSP31	Q04432	237 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	SSQ1	Q05931	657 aa	Predicted RBP	3.58	□□□□□ -1.84
UBC8	YEL012W	YLR413W	Q06689	675 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	GRE1	Q08969	168 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	SPO24	Q3E752	67 aa		3.58	□□□□□ -1.84
UBC8	YEL012W	ARO3	P14843	370 aa	Known RBP	3.57	□□□□□ -1.84
UBC8	YEL012W	HSP30	P25619	332 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	TOA1	P32773	286 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	TRS65	P32893	560 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	MDL1	P33310	695 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	SOR1	P35497	357 aa	Known RBP	3.57	□□□□□ -1.84
UBC8	YEL012W	RCK1	P38622	512 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	KRE29	P40026	464 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	PRE6	P40303	254 aa	Known RBP	3.57	□□□□□ -1.84
UBC8	YEL012W	NAS2	P40555	220 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	SIP18	P50263	79 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	BRR6	P53062	197 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	OCA2	P53949	197 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	RCE1	Q03530	315 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	RCF1	Q03713	159 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	SOR2	Q07786	357 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	HNT3	Q08702	217 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	NCA2	Q12374	616 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	HMS1	Q12398	434 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	YOR343C	Q12484	108 aa		3.57	□□□□□ -1.84
UBC8	YEL012W	SCEI	P03882	235 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	RPL35A	P0CX84	120 aa	Known RBP	3.56	□□□□□ -1.84
UBC8	YEL012W	RPL35B	P0CX85	120 aa	Known RBP	3.56	□□□□□ -1.84
UBC8	YEL012W	YPK2	P18961	677 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	RPC19	P28000	142 aa	Known RBP	3.56	□□□□□ -1.84
UBC8	YEL012W	ECM25	P32525	599 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	REC114	P32841	428 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	BIG1	P38813	335 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	GWT1	P47026	490 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	YJL055W	P47044	245 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	YJR011C	P47086	261 aa	Predicted RBP	3.56	□□□□□ -1.84
UBC8	YEL012W	MTM1	P53320	366 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	APJ1	P53940	528 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	SCS7	Q03529	384 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	YDR387C	Q04162	555 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	IRC19	Q07843	230 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	GAT3	Q07928	141 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	SRL2	Q12020	392 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	YHR214C-E	Q8TGK0	99 aa		3.56	□□□□□ -1.84
UBC8	YEL012W	RPL15A	P05748	204 aa	Known RBP	3.55	□□□□□ -1.84
UBC8	YEL012W	SPO7	P18410	259 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	EXO70	P19658	623 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	RPS1B	P23248	255 aa	Known RBP	3.55	□□□□□ -1.84
UBC8	YEL012W	EXG1	P23776	448 aa	Known RBP	3.55	□□□□□ -1.84
UBC8	YEL012W	RNA14	P25298	677 aa	Known RBP	3.55	□□□□□ -1.84
UBC8	YEL012W	GIT1	P25346	518 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	PHO91	P27514	894 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	PUP2	P32379	260 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	NDC1	P32500	655 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	CHK1	P38147	527 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	MTW1	P39731	289 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	ISC1	P40015	477 aa	Known RBP	3.55	□□□□□ -1.84
UBC8	YEL012W	YER121W	P40076	114 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	COG3	P40094	801 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	YER188W	P40103	239 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	VHS2	P40463	436 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	RPR2	P40571	144 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	UBC13	P52490	153 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	SBH2	P52871	88 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	RPL6A	Q02326	176 aa	Known RBP	3.55	□□□□□ -1.84
UBC8	YEL012W	KRE28	Q04431	385 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	YPR147C	Q06522	304 aa	Known RBP	3.55	□□□□□ -1.84
UBC8	YEL012W	CSI2	Q08054	341 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	FIT3	Q08907	204 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	RTC5	Q12108	567 aa	Known RBP	3.55	□□□□□ -1.84
UBC8	YEL012W	FRE8	Q12209	686 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	YOR214C	Q12282	236 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	MHF1	Q3E835	90 aa		3.55	□□□□□ -1.84
UBC8	YEL012W	REP1	P03871	373 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	ILV5	P06168	395 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	RPS16A	P0CX51	143 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	RPS16B	P0CX52	143 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	PCL1	P24867	279 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	YCR100C	P25606	316 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	APE2	P32454	952 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	TIM12	P32830	109 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	VMA11	P32842	164 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	SPT10	P35208	640 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	YNK1	P36010	153 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	YCR041W	P37265	110 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	ECM8	P38246	354 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	YHL044W	P38727	235 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	MNN9	P39107	395 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	GDI1	P39958	451 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	GLR1	P41921	483 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	YNR062C	P53748	327 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	YIF1	P53845	314 aa	Known RBP	3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms