RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C CIN2P46670 268 aa9.38□□□□□ -0.91
VPS60YDR486C RPA14P50106 137 aa9.38□□□□□ -0.91
VPS60YDR486C RSM23Q01163 450 aa9.38□□□□□ -0.91
VPS60YDR486C DIG2Q03373 323 aaKnown RBP9.38□□□□□ -0.91
VPS60YDR486C THI72Q08579 599 aa9.38□□□□□ -0.91
VPS60YDR486C YPL199CQ08954 240 aa9.38□□□□□ -0.91
VPS60YDR486C IZH2Q12442 317 aa9.38□□□□□ -0.91
VPS60YDR486C HPA3P39979 161 aa9.37□□□□□ -0.91
VPS60YDR486C CTK2P46962 323 aa9.37□□□□□ -0.91
VPS60YDR486C UBX6P47049 396 aa9.37□□□□□ -0.91
VPS60YDR486C ACS2P52910 683 aaKnown RBP9.37□□□□□ -0.91
VPS60YDR486C POP6P53218 158 aa9.37□□□□□ -0.91
VPS60YDR486C SLI1P53304 468 aa9.37□□□□□ -0.91
VPS60YDR486C NRK1P53915 240 aa9.37□□□□□ -0.91
VPS60YDR486C RCE1Q03530 315 aa9.37□□□□□ -0.91
VPS60YDR486C YMR130WQ04223 302 aa9.37□□□□□ -0.91
VPS60YDR486C FRE3Q08905 711 aa9.37□□□□□ -0.91
VPS60YDR486C INP53Q12271 1107 aa9.37□□□□□ -0.91
VPS60YDR486C COX17Q12287 69 aa9.37□□□□□ -0.91
VPS60YDR486C ISA2Q12425 185 aa9.37□□□□□ -0.91
VPS60YDR486C MAK32P23060 363 aa9.36□□□□□ -0.91
VPS60YDR486C SNC2P33328 115 aa9.36□□□□□ -0.91
VPS60YDR486C YER084WP40057 128 aa9.36□□□□□ -0.91
VPS60YDR486C BUD8P41698 603 aa9.36□□□□□ -0.91
VPS60YDR486C BUD25P85052 153 aa9.36□□□□□ -0.91
VPS60YDR486C YKR005CQ02203 525 aa9.36□□□□□ -0.91
VPS60YDR486C CYC1P00044 109 aaPredicted RBP9.35□□□□□ -0.91
VPS60YDR486C FUR4P05316 633 aaKnown RBP9.35□□□□□ -0.91
VPS60YDR486C DBF20P32328 564 aa9.35□□□□□ -0.91
VPS60YDR486C CLG1P35190 452 aa9.35□□□□□ -0.91
VPS60YDR486C ATF1P40353 525 aa9.35□□□□□ -0.91
VPS60YDR486C MOB2P43563 287 aa9.35□□□□□ -0.91
VPS60YDR486C YJL016WP47072 561 aa9.35□□□□□ -0.91
VPS60YDR486C PHB2P50085 310 aa9.35□□□□□ -0.91
VPS60YDR486C ARO8P53090 500 aaKnown RBP9.35□□□□□ -0.91
VPS60YDR486C TPN1P53099 579 aa9.35□□□□□ -0.91
VPS60YDR486C VHT1P53241 593 aa9.35□□□□□ -0.91
VPS60YDR486C SCW4P53334 386 aaKnown RBP9.35□□□□□ -0.91
VPS60YDR486C ALG12P53730 551 aa9.35□□□□□ -0.91
VPS60YDR486C RPL6AQ02326 176 aaKnown RBP9.35□□□□□ -0.91
VPS60YDR486C CRR1Q05790 422 aa9.35□□□□□ -0.91
VPS60YDR486C TGS1Q12052 315 aa9.35□□□□□ -0.91
VPS60YDR486C PUP1P25043 261 aa9.34□□□□□ -0.91
VPS60YDR486C MRT4P33201 236 aaKnown RBP9.34□□□□□ -0.91
VPS60YDR486C APL3P38065 1025 aa9.34□□□□□ -0.91
VPS60YDR486C SEN34P39707 275 aa9.34□□□□□ -0.91
VPS60YDR486C SMB1P40018 196 aaKnown RBP9.34□□□□□ -0.91
VPS60YDR486C FMP48P53233 369 aa9.34□□□□□ -0.91
VPS60YDR486C KEI1Q06346 221 aa9.34□□□□□ -0.91
VPS60YDR486C YLR358CO13565 187 aa9.33□□□□□ -0.92
VPS60YDR486C TDH3P00359 332 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
VPS60YDR486C DSF1P0CX08 502 aa9.33□□□□□ -0.92
VPS60YDR486C YNR073CP0CX09 502 aa9.33□□□□□ -0.92
VPS60YDR486C MCM1P11746 286 aa9.33□□□□□ -0.92
VPS60YDR486C PET18P25362 215 aa9.33□□□□□ -0.92
VPS60YDR486C AFG1P32317 509 aa9.33□□□□□ -0.92
VPS60YDR486C KRE6P32486 720 aa9.33□□□□□ -0.92
VPS60YDR486C MTC7P32633 139 aa9.33□□□□□ -0.92
VPS60YDR486C RIB7P33312 244 aa9.33□□□□□ -0.92
VPS60YDR486C SEC66P33754 206 aa9.33□□□□□ -0.92
VPS60YDR486C QDR1P40475 563 aa9.33□□□□□ -0.92
VPS60YDR486C SYS1P41544 203 aa9.33□□□□□ -0.92
VPS60YDR486C LSM7P53905 115 aaKnown RBP9.33□□□□□ -0.92
VPS60YDR486C RNH201P53942 307 aa9.33□□□□□ -0.92
VPS60YDR486C HHT1P61830 136 aa9.33□□□□□ -0.92
VPS60YDR486C CTF19Q02732 369 aa9.33□□□□□ -0.92
VPS60YDR486C API2Q04413 109 aa9.33□□□□□ -0.92
VPS60YDR486C PHO92Q06390 306 aa9.33□□□□□ -0.92
VPS60YDR486C FIT3Q08907 204 aa9.33□□□□□ -0.92
VPS60YDR486C YIL060WP40519 144 aa9.32□□□□□ -0.92
VPS60YDR486C YKE4P40544 346 aa9.32□□□□□ -0.92
VPS60YDR486C CAT5P41735 233 aa9.32□□□□□ -0.92
VPS60YDR486C GPI14P47088 403 aaKnown RBP9.32□□□□□ -0.92
VPS60YDR486C MSE1P48525 536 aa9.32□□□□□ -0.92
VPS60YDR486C YGL159WP53110 370 aa9.32□□□□□ -0.92
VPS60YDR486C YNR048WP53740 393 aa9.32□□□□□ -0.92
VPS60YDR486C HAS1Q03532 505 aaKnown RBP9.32□□□□□ -0.92
VPS60YDR486C GPM1P00950 247 aaKnown RBP9.31□□□□□ -0.92
VPS60YDR486C RPL30P14120 105 aaKnown RBP9.31□□□□□ -0.92
VPS60YDR486C RPI1P23250 407 aaKnown RBP9.31□□□□□ -0.92
VPS60YDR486C HXT2P23585 541 aa9.31□□□□□ -0.92
VPS60YDR486C HYM1P32464 399 aa9.31□□□□□ -0.92
VPS60YDR486C PPZ2P33329 710 aa9.31□□□□□ -0.92
VPS60YDR486C YHR122WP38829 231 aa9.31□□□□□ -0.92
VPS60YDR486C AIM20P40451 204 aa9.31□□□□□ -0.92
VPS60YDR486C SIP18P50263 79 aa9.31□□□□□ -0.92
VPS60YDR486C ODC2Q99297 307 aa9.31□□□□□ -0.92
VPS60YDR486C RPL35AP0CX84 120 aaKnown RBP9.3□□□□□ -0.92
VPS60YDR486C RPL35BP0CX85 120 aaKnown RBP9.3□□□□□ -0.92
VPS60YDR486C PET54P10834 293 aa9.3□□□□□ -0.92
VPS60YDR486C ARO4P32449 370 aaKnown RBP9.3□□□□□ -0.92
VPS60YDR486C UMP1P38293 148 aa9.3□□□□□ -0.92
VPS60YDR486C YHL037CP38733 133 aa9.3□□□□□ -0.92
VPS60YDR486C YFL051CP43552 160 aa9.3□□□□□ -0.92
VPS60YDR486C BXI1P48558 297 aa9.3□□□□□ -0.92
VPS60YDR486C YGR042WP53227 271 aa9.3□□□□□ -0.92
VPS60YDR486C YDR391CQ04170 232 aa9.3□□□□□ -0.92
VPS60YDR486C YLR283WQ05867 314 aa9.3□□□□□ -0.92
VPS60YDR486C MEC1P38111 2368 aa9.29□□□□□ -0.92
VPS60YDR486C CHO1P08456 276 aa9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms