RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C AIM45Q12480 344 aaKnown RBP2.94□□□□□ -1.94
CDC40YDR364C FMP16Q12497 93 aa2.94□□□□□ -1.94
CDC40YDR364C KSS1P14681 368 aa2.93□□□□□ -1.94
CDC40YDR364C RPS1BP23248 255 aaKnown RBP2.93□□□□□ -1.94
CDC40YDR364C LSB5P25369 354 aa2.93□□□□□ -1.94
CDC40YDR364C YCR100CP25606 316 aa2.93□□□□□ -1.94
CDC40YDR364C TAH1P25638 111 aaPredicted RBP2.93□□□□□ -1.94
CDC40YDR364C CWP1P28319 239 aa2.93□□□□□ -1.94
CDC40YDR364C MRPL6P32904 214 aa2.93□□□□□ -1.94
CDC40YDR364C LHP1P33399 275 aaKnown RBP2.93□□□□□ -1.94
CDC40YDR364C YPK3P38070 525 aa2.93□□□□□ -1.94
CDC40YDR364C ECM8P38246 354 aa2.93□□□□□ -1.94
CDC40YDR364C YBR285WP38354 144 aa2.93□□□□□ -1.94
CDC40YDR364C YHR122WP38829 231 aa2.93□□□□□ -1.94
CDC40YDR364C RCY1P39531 840 aa2.93□□□□□ -1.94
CDC40YDR364C UTP25P40498 721 aaKnown RBP2.93□□□□□ -1.94
CDC40YDR364C RTS2P40962 232 aa2.93□□□□□ -1.94
CDC40YDR364C MDV1P47025 714 aa2.93□□□□□ -1.94
CDC40YDR364C LOH1P47055 219 aa2.93□□□□□ -1.94
CDC40YDR364C KRE28Q04431 385 aa2.93□□□□□ -1.94
CDC40YDR364C BNA5Q05979 453 aa2.93□□□□□ -1.94
CDC40YDR364C MRPL51Q06090 140 aaPredicted RBP2.93□□□□□ -1.94
CDC40YDR364C SKI7Q08491 747 aaPredicted RBP2.93□□□□□ -1.94
CDC40YDR364C MMT2Q08970 484 aa2.93□□□□□ -1.94
CDC40YDR364C BTS1Q12051 335 aa2.93□□□□□ -1.94
CDC40YDR364C BSC1Q12140 328 aa2.93□□□□□ -1.94
CDC40YDR364C MED4Q12343 284 aa2.93□□□□□ -1.94
CDC40YDR364C ORT1Q12375 292 aa2.93□□□□□ -1.94
CDC40YDR364C MHF1Q3E835 90 aa2.93□□□□□ -1.94
CDC40YDR364C ECM15P35195 104 aa2.92□□□□□ -1.94
CDC40YDR364C SDS24P38314 527 aa2.92□□□□□ -1.94
CDC40YDR364C LEU5P38702 357 aa2.92□□□□□ -1.94
CDC40YDR364C BIG1P38813 335 aa2.92□□□□□ -1.94
CDC40YDR364C EGD2P38879 174 aaKnown RBP2.92□□□□□ -1.94
CDC40YDR364C VPS52P39904 641 aa2.92□□□□□ -1.94
CDC40YDR364C MSS2P40990 351 aa2.92□□□□□ -1.94
CDC40YDR364C YGR201CP42936 225 aa2.92□□□□□ -1.94
CDC40YDR364C STE24P47154 453 aa2.92□□□□□ -1.94
CDC40YDR364C IBA57P47158 497 aa2.92□□□□□ -1.94
CDC40YDR364C YGL260WP53056 76 aa2.92□□□□□ -1.94
CDC40YDR364C PRM8P53174 237 aa2.92□□□□□ -1.94
CDC40YDR364C CDH1P53197 566 aa2.92□□□□□ -1.94
CDC40YDR364C COG5P53951 403 aa2.92□□□□□ -1.94
CDC40YDR364C SED5Q01590 340 aa2.92□□□□□ -1.94
CDC40YDR364C SWP1Q02795 286 aa2.92□□□□□ -1.94
CDC40YDR364C YMR099CQ03161 297 aaKnown RBP2.92□□□□□ -1.94
CDC40YDR364C YLR126CQ12288 251 aa2.92□□□□□ -1.94
CDC40YDR364C MRX4Q12467 430 aa2.92□□□□□ -1.94
CDC40YDR364C GDH1P07262 454 aaKnown RBP2.91□□□□□ -1.94
CDC40YDR364C PET9P18239 318 aaKnown RBP2.91□□□□□ -1.94
CDC40YDR364C RPB5P20434 215 aa2.91□□□□□ -1.94
CDC40YDR364C GPI12P23797 304 aa2.91□□□□□ -1.94
CDC40YDR364C MXR2P25566 168 aa2.91□□□□□ -1.94
CDC40YDR364C VMA5P31412 392 aaKnown RBP2.91□□□□□ -1.94
CDC40YDR364C YKR015CP36111 568 aa2.91□□□□□ -1.94
CDC40YDR364C SPO73P40031 143 aa2.91□□□□□ -1.94
CDC40YDR364C COG3P40094 801 aa2.91□□□□□ -1.94
CDC40YDR364C YIL152WP40455 235 aa2.91□□□□□ -1.94
CDC40YDR364C BNA6P43619 295 aa2.91□□□□□ -1.94
CDC40YDR364C YDL186WP48568 277 aa2.91□□□□□ -1.94
CDC40YDR364C RPS12P48589 143 aaKnown RBP2.91□□□□□ -1.94
CDC40YDR364C NAT4Q04751 285 aa2.91□□□□□ -1.94
CDC40YDR364C YLR030WQ07967 263 aa2.91□□□□□ -1.94
CDC40YDR364C FDH1Q08911 376 aa2.91□□□□□ -1.94
CDC40YDR364C YOP1Q12402 180 aa2.91□□□□□ -1.94
CDC40YDR364C RIB3Q99258 208 aa2.91□□□□□ -1.94
CDC40YDR364C MED11Q99278 115 aa2.91□□□□□ -1.94
CDC40YDR364C RPL42AP0CX27 106 aaKnown RBP2.9□□□□□ -1.94
CDC40YDR364C RPL42BP0CX28 106 aaKnown RBP2.9□□□□□ -1.94
CDC40YDR364C RPS16AP0CX51 143 aaKnown RBP2.9□□□□□ -1.94
CDC40YDR364C RPS16BP0CX52 143 aaKnown RBP2.9□□□□□ -1.94
CDC40YDR364C RPS5P26783 225 aaKnown RBP2.9□□□□□ -1.94
CDC40YDR364C IDH1P28834 360 aaKnown RBP RIP-Chip data2.9□□□□□ -1.94not detected
CDC40YDR364C ASF2P32448 525 aaPredicted RBP2.9□□□□□ -1.94
CDC40YDR364C DOA4P32571 926 aa2.9□□□□□ -1.94
CDC40YDR364C MSN4P33749 630 aa2.9□□□□□ -1.94
CDC40YDR364C YOX1P34161 385 aa2.9□□□□□ -1.94
CDC40YDR364C VPS51P36116 164 aa2.9□□□□□ -1.94
CDC40YDR364C GOS1P38736 223 aa2.9□□□□□ -1.94
CDC40YDR364C TRR2P38816 342 aa2.9□□□□□ -1.94
CDC40YDR364C PET100P38958 111 aa2.9□□□□□ -1.94
CDC40YDR364C RRG9P40156 214 aa2.9□□□□□ -1.94
CDC40YDR364C GWT1P47026 490 aa2.9□□□□□ -1.94
CDC40YDR364C TOS2P50078 622 aa2.9□□□□□ -1.94
CDC40YDR364C NQM1P53228 333 aaPredicted RBP2.9□□□□□ -1.94
CDC40YDR364C SYF2P53277 215 aaPredicted RBP2.9□□□□□ -1.94
CDC40YDR364C TPS1Q00764 495 aaKnown RBP2.9□□□□□ -1.94
CDC40YDR364C RVB1Q03940 463 aaKnown RBP2.9□□□□□ -1.94
CDC40YDR364C GPN3Q06543 272 aa2.9□□□□□ -1.94
CDC40YDR364C YPR172WQ06608 200 aa2.9□□□□□ -1.94
CDC40YDR364C TIM18Q08749 192 aa2.9□□□□□ -1.94
CDC40YDR364C YDL009CQ12210 107 aa2.9□□□□□ -1.94
CDC40YDR364C IDP1P21954 428 aaKnown RBP2.89□□□□□ -1.95
CDC40YDR364C DPB2P24482 689 aaPredicted RBP2.89□□□□□ -1.95
CDC40YDR364C YCR043CP25361 127 aa2.89□□□□□ -1.95
CDC40YDR364C RPL5P26321 297 aaKnown RBP2.89□□□□□ -1.95
CDC40YDR364C VMA6P32366 345 aaKnown RBP2.89□□□□□ -1.95
CDC40YDR364C ZUO1P32527 433 aaKnown RBP2.89□□□□□ -1.95
CDC40YDR364C SUA5P32579 426 aa2.89□□□□□ -1.95
CDC40YDR364C PTR2P32901 601 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms