RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	HIS3	P06633	220 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	RAD3	P06839	778 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	PRS2	P38620	318 aa	Known RBP	3.05	□□□□□ -1.92
NSE3	YDR288W	YAR1	P46683	200 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	OST3	P48439	350 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	NBP1	P52919	319 aa	Predicted RBP	3.05	□□□□□ -1.92
NSE3	YDR288W	YMR166C	Q03829	368 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	HRT1	Q08273	121 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	SLD7	Q08457	257 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	FEX1	Q08913	375 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	FEX2	Q08991	375 aa		3.05	□□□□□ -1.92
NSE3	YDR288W	QRI5	P32344	111 aa		3.04	□□□□□ -1.92
NSE3	YDR288W	SDH4	P37298	181 aa		3.04	□□□□□ -1.92
NSE3	YDR288W	SPT8	P38915	602 aa		3.04	□□□□□ -1.92
NSE3	YDR288W	SYF2	P53277	215 aa	Predicted RBP	3.04	□□□□□ -1.92
NSE3	YDR288W	PST1	Q12355	444 aa		3.04	□□□□□ -1.92
NSE3	YDR288W	YBL112C	Q3E7Y4	105 aa		3.04	□□□□□ -1.92
NSE3	YDR288W	MSF1	P08425	469 aa		3.03	□□□□□ -1.92
NSE3	YDR288W	POX1	P13711	748 aa		3.03	□□□□□ -1.92
NSE3	YDR288W	SFC1	P33303	322 aa		3.03	□□□□□ -1.92
NSE3	YDR288W	YER084W	P40057	128 aa		3.03	□□□□□ -1.92
NSE3	YDR288W	YER188W	P40103	239 aa		3.03	□□□□□ -1.92
NSE3	YDR288W	AAH1	P53909	347 aa		3.03	□□□□□ -1.92
NSE3	YDR288W	TDH2	P00358	332 aa	Known RBP	3.02	□□□□□ -1.93
NSE3	YDR288W	COY1	P34237	679 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	MAL32	P38158	584 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	BIG1	P38813	335 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	TEM1	P38987	245 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	DSN1	P40568	576 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	BNA6	P43619	295 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	MAL12	P53341	584 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	RRN5	Q02983	363 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	PLB3	Q08108	686 aa		3.02	□□□□□ -1.93
NSE3	YDR288W	CLP1	Q08685	445 aa	Predicted RBP	3.02	□□□□□ -1.93
NSE3	YDR288W	DPB2	P24482	689 aa	Predicted RBP	3.01	□□□□□ -1.93
NSE3	YDR288W	CWP1	P28319	239 aa		3.01	□□□□□ -1.93
NSE3	YDR288W	UTR5	P32630	166 aa		3.01	□□□□□ -1.93
NSE3	YDR288W	AGX1	P43567	385 aa		3.01	□□□□□ -1.93
NSE3	YDR288W	YJL028W	P47062	111 aa		3.01	□□□□□ -1.93
NSE3	YDR288W	YJR141W	P47172	347 aa	Predicted RBP	3.01	□□□□□ -1.93
NSE3	YDR288W	ASI3	P53983	676 aa		3.01	□□□□□ -1.93
NSE3	YDR288W	BOP2	Q06150	570 aa		3.01	□□□□□ -1.93
NSE3	YDR288W	YLR173W	Q06247	608 aa		3.01	□□□□□ -1.93
NSE3	YDR288W	SDO1	Q07953	250 aa	Known RBP	3.01	□□□□□ -1.93
NSE3	YDR288W	SMT3	Q12306	101 aa	Known RBP	3.01	□□□□□ -1.93
NSE3	YDR288W	RNP1	P32385	249 aa		3	□□□□□ -1.93
NSE3	YDR288W	JEN1	P36035	616 aa		3	□□□□□ -1.93
NSE3	YDR288W	PRS4	P38063	326 aa	Predicted RBP	3	□□□□□ -1.93
NSE3	YDR288W	MIX17	Q03667	156 aa		3	□□□□□ -1.93
NSE3	YDR288W	ATG17	Q06410	417 aa		3	□□□□□ -1.93
NSE3	YDR288W	MED4	Q12343	284 aa		3	□□□□□ -1.93
NSE3	YDR288W	YBL008W-A	Q3E821	79 aa		3	□□□□□ -1.93
NSE3	YDR288W	RAD10	P06838	210 aa		2.99	□□□□□ -1.93
NSE3	YDR288W	COS2	P0CX12	379 aa		2.99	□□□□□ -1.93
NSE3	YDR288W	COS3	P0CX13	379 aa		2.99	□□□□□ -1.93
NSE3	YDR288W	RNA15	P25299	296 aa	Predicted RBP	2.99	□□□□□ -1.93
NSE3	YDR288W	SSH1	P38353	490 aa	Known RBP	2.99	□□□□□ -1.93
NSE3	YDR288W	PIR5	P46999	287 aa		2.99	□□□□□ -1.93
NSE3	YDR288W	MRPL50	P53724	139 aa		2.99	□□□□□ -1.93
NSE3	YDR288W	YNL134C	P53912	376 aa	Known RBP	2.99	□□□□□ -1.93
NSE3	YDR288W	FCF1	Q05498	189 aa	Predicted RBP	2.99	□□□□□ -1.93
NSE3	YDR288W	YPR147C	Q06522	304 aa	Known RBP	2.99	□□□□□ -1.93
NSE3	YDR288W	TOM40	P23644	387 aa	Known RBP	2.98	□□□□□ -1.93
NSE3	YDR288W	RPT5	P33297	434 aa	Known RBP	2.98	□□□□□ -1.93
NSE3	YDR288W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
NSE3	YDR288W	YHR045W	P38775	560 aa		2.98	□□□□□ -1.93
NSE3	YDR288W	YPR098C	Q06089	161 aa		2.98	□□□□□ -1.93
NSE3	YDR288W	RRS1	Q08746	203 aa	Known RBP	2.98	□□□□□ -1.93
NSE3	YDR288W	YOR029W	Q12243	111 aa		2.98	□□□□□ -1.93
NSE3	YDR288W	SNF8	Q12483	233 aa		2.98	□□□□□ -1.93
NSE3	YDR288W	SGE1	P33335	543 aa		2.97	□□□□□ -1.93
NSE3	YDR288W	MRX3	P38172	270 aa		2.97	□□□□□ -1.93
NSE3	YDR288W	SMB1	P40018	196 aa	Known RBP	2.97	□□□□□ -1.93
NSE3	YDR288W	USE1	P53146	245 aa		2.97	□□□□□ -1.93
NSE3	YDR288W	SSU72	P53538	206 aa	Predicted RBP	2.97	□□□□□ -1.93
NSE3	YDR288W	CDD1	Q06549	142 aa		2.97	□□□□□ -1.93
NSE3	YDR288W	AGC1	Q12482	902 aa		2.97	□□□□□ -1.93
NSE3	YDR288W	FZO1	P38297	855 aa		2.96	□□□□□ -1.94
NSE3	YDR288W	EMI1	Q04406	187 aa		2.96	□□□□□ -1.94
NSE3	YDR288W	GRH1	Q04410	372 aa	Known RBP	2.96	□□□□□ -1.94
NSE3	YDR288W	PAM18	Q07914	168 aa		2.96	□□□□□ -1.94
NSE3	YDR288W	YPR011C	Q12251	326 aa		2.96	□□□□□ -1.94
NSE3	YDR288W	SNU23	Q12368	194 aa	Predicted RBP	2.96	□□□□□ -1.94
NSE3	YDR288W	YPL247C	Q12523	523 aa		2.96	□□□□□ -1.94
NSE3	YDR288W	HOM6	P31116	359 aa	Known RBP	2.95	□□□□□ -1.94
NSE3	YDR288W	MRPL39	P36533	70 aa		2.95	□□□□□ -1.94
NSE3	YDR288W	SNZ3	P43545	298 aa		2.95	□□□□□ -1.94
NSE3	YDR288W	GON7	P46984	123 aa		2.95	□□□□□ -1.94
NSE3	YDR288W	GOT1	Q03554	138 aa		2.95	□□□□□ -1.94
NSE3	YDR288W	YMR114C	Q04471	368 aa	Known RBP	2.95	□□□□□ -1.94
NSE3	YDR288W	YDR124W	Q04608	324 aa		2.95	□□□□□ -1.94
NSE3	YDR288W	RDS3	Q06835	107 aa	Predicted RBP	2.95	□□□□□ -1.94
NSE3	YDR288W	MSH5	Q12175	901 aa		2.95	□□□□□ -1.94
NSE3	YDR288W	GEP5	Q12393	293 aa		2.95	□□□□□ -1.94
NSE3	YDR288W	YKR104W	P0CE69	306 aa		2.94	□□□□□ -1.94
NSE3	YDR288W	GDH2	P33327	1092 aa	Known RBP	2.94	□□□□□ -1.94
NSE3	YDR288W	DRE2	P36152	348 aa		2.94	□□□□□ -1.94
NSE3	YDR288W	GLG2	P47011	380 aa		2.94	□□□□□ -1.94
NSE3	YDR288W	MDM34	P53083	459 aa		2.94	□□□□□ -1.94
NSE3	YDR288W	RHO3	Q00245	231 aa	Known RBP	2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms