RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	PRM15	Q03262	622 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	YMD8	Q03697	442 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	YLR413W	Q06689	675 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	SAM4	Q08985	325 aa	Known RBP	5.15	□□□□□ -1.59
TRP1	YDR007W	YDR262W	Q12331	272 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	SAS5	Q99314	248 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	KIN28	P06242	306 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	SPT3	P06844	337 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	GDH1	P07262	454 aa	Known RBP	5.14	□□□□□ -1.59
TRP1	YDR007W	RPS1B	P23248	255 aa	Known RBP	5.14	□□□□□ -1.59
TRP1	YDR007W	RPL24B	P24000	155 aa	Known RBP	5.14	□□□□□ -1.59
TRP1	YDR007W	CDC50	P25656	391 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	PRO3	P32263	286 aa	Known RBP	5.14	□□□□□ -1.59
TRP1	YDR007W	SCM4	P32564	187 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	RPS1A	P33442	255 aa	Known RBP	5.14	□□□□□ -1.59
TRP1	YDR007W	SPO23	P33757	523 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	AIM18	P38884	321 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	CYC2	P38909	366 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	IPT1	P38954	527 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	YMR144W	P40214	342 aa	Known RBP	5.14	□□□□□ -1.59
TRP1	YDR007W	PGD1	P40356	397 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	GNA1	P43577	159 aa	Predicted RBP	5.14	□□□□□ -1.59
TRP1	YDR007W	BIO3	P50277	480 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	TRM112	P53738	135 aa	Predicted RBP	5.14	□□□□□ -1.59
TRP1	YDR007W	NUP116	Q02630	1113 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	GPN3	Q06543	272 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	MRPL35	Q06678	367 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	YET3	Q07451	203 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	SHS1	Q07657	551 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	FYV7	Q12247	151 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	YLR108C	Q12259	485 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	AHC1	Q12433	566 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	RGS2	Q99188	309 aa		5.14	□□□□□ -1.59
TRP1	YDR007W	RAD7	P06779	565 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	CAR2	P07991	424 aa	Known RBP	5.13	□□□□□ -1.59
TRP1	YDR007W	MXR2	P25566	168 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	POF1	P25576	258 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	PDC2	P32896	925 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	TIR2	P33890	251 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	PTC1	P35182	281 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	AIM29	P36154	155 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	ECM8	P38246	354 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	MBA1	P38300	278 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	IKI1	P38874	309 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	NVJ1	P38881	321 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	COX14	P39103	70 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	SOP4	P39543	234 aa	Predicted RBP	5.13	□□□□□ -1.59
TRP1	YDR007W	NCA3	P46955	337 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	PAC10	P48363	199 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	SEH1	P53011	349 aa	Known RBP	5.13	□□□□□ -1.59
TRP1	YDR007W	MSO1	P53604	210 aa	Known RBP	5.13	□□□□□ -1.59
TRP1	YDR007W	CUS2	P53830	285 aa	Predicted RBP	5.13	□□□□□ -1.59
TRP1	YDR007W	CRZ1	P53968	678 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	YML122C	Q03207	126 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	PRM6	Q04705	352 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	MHF1	Q3E835	90 aa		5.13	□□□□□ -1.59
TRP1	YDR007W	STE2	D6VTK4	431 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	MRP1	P10662	321 aa	Known RBP	5.12	□□□□□ -1.59
TRP1	YDR007W	FUS3	P16892	353 aa	Known RBP	5.12	□□□□□ -1.59
TRP1	YDR007W	COQ1	P18900	473 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	YPK2	P18961	677 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	YPS1	P32329	569 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	AEP1	P32493	518 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	SKG6	P32900	734 aa	Predicted RBP	5.12	□□□□□ -1.59
TRP1	YDR007W	AVT5	P38176	459 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	SUR2	P38992	349 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	IDP2	P41939	412 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	YGR201C	P42936	225 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	AGX1	P43567	385 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	WWM1	P43582	211 aa	Known RBP	5.12	□□□□□ -1.59
TRP1	YDR007W	YDL186W	P48568	277 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	MRH4	P53166	561 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	JAC1	P53193	184 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	NQM1	P53228	333 aa	Predicted RBP	5.12	□□□□□ -1.59
TRP1	YDR007W	HCH1	P53834	153 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	MYO5	Q04439	1219 aa	Known RBP	5.12	□□□□□ -1.59
TRP1	YDR007W	RTT103	Q05543	409 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	RBD2	Q12270	262 aa		5.12	□□□□□ -1.59
TRP1	YDR007W	CDC7	P06243	507 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	YFR010W-A	P0C5N0	62 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	RPL18A	P0CX49	186 aa	Known RBP	5.11	□□□□□ -1.59
TRP1	YDR007W	RPL18B	P0CX50	186 aa	Known RBP	5.11	□□□□□ -1.59
TRP1	YDR007W	MET16	P18408	261 aa	Predicted RBP	5.11	□□□□□ -1.59
TRP1	YDR007W	UBC8	P28263	218 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	LDS1	P31379	325 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	PHA2	P32452	334 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	MRPS5	P33759	307 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	VPS45	P38932	577 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	SCC4	P40090	624 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	PEP8	P40335	379 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	YIL054W	P40524	105 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	LOC1	P43586	204 aa	Predicted RBP	5.11	□□□□□ -1.59
TRP1	YDR007W	VOA1	P53262	265 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	YNL033W	P53964	284 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	YNL019C	P53975	284 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	ELP3	Q02908	557 aa	Known RBP	5.11	□□□□□ -1.59
TRP1	YDR007W	NAT4	Q04751	285 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	BOP2	Q06150	570 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	HNT3	Q08702	217 aa		5.11	□□□□□ -1.59
TRP1	YDR007W	SPC3	Q12133	184 aa		5.11	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms