RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeast

Gene KIN28, Length 921 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KIN28	YDL108W	FAR10	Q06001	478 aa		4.09	□□□□□ -1.75
KIN28	YDL108W	MHR1	Q06630	226 aa		4.09	□□□□□ -1.75
KIN28	YDL108W	MRX9	Q07349	420 aa	Known RBP	4.09	□□□□□ -1.75
KIN28	YDL108W	THP1	Q08231	455 aa		4.09	□□□□□ -1.75
KIN28	YDL108W	SGT1	Q08446	395 aa		4.09	□□□□□ -1.75
KIN28	YDL108W	GEP5	Q12393	293 aa		4.09	□□□□□ -1.75
KIN28	YDL108W	EFG1	Q3E705	233 aa	Known RBP	4.09	□□□□□ -1.75
KIN28	YDL108W	HAP2	P06774	265 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	FCY2	P17064	533 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	MRPS28	P21771	286 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	PPH21	P23594	369 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	EXG1	P23776	448 aa	Known RBP	4.08	□□□□□ -1.76
KIN28	YDL108W	PMT2	P31382	759 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	SHP1	P34223	423 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	PHD1	P36093	366 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	CBP4	P37267	147 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	RCK2	P38623	610 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	PHO90	P39535	881 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	AIM2	P39721	246 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	YAL037W	P39728	267 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	PMT5	P52867	743 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	JAC1	P53193	184 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	PEX31	P53203	462 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	YLR152C	P54072	576 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	SWP1	Q02795	286 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	NUP53	Q03790	475 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	VBA1	Q04301	562 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	ASA1	Q06822	443 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	HRD1	Q08109	551 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	ZEO1	Q08245	113 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	SKI7	Q08491	747 aa	Predicted RBP	4.08	□□□□□ -1.76
KIN28	YDL108W	RRS1	Q08746	203 aa	Known RBP	4.08	□□□□□ -1.76
KIN28	YDL108W	TAF10	Q12030	206 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	YCT1	Q12235	531 aa		4.08	□□□□□ -1.76
KIN28	YDL108W	DRS2	P39524	1355 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	MES1	P00958	751 aa	Known RBP	4.07	□□□□□ -1.76
KIN28	YDL108W	CYC3	P06182	269 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	ARF2	P19146	181 aa	Known RBP	4.07	□□□□□ -1.76
KIN28	YDL108W	YCR023C	P25351	611 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	POF1	P25576	258 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	QRI5	P32344	111 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	ECM15	P35195	104 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	YBR285W	P38354	144 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	IPI1	P38803	334 aa	Predicted RBP	4.07	□□□□□ -1.76
KIN28	YDL108W	AIM18	P38884	321 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	GLE2	P40066	365 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	SHO1	P40073	367 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	YMR144W	P40214	342 aa	Known RBP	4.07	□□□□□ -1.76
KIN28	YDL108W	PGD1	P40356	397 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	YIL067C	P40514	678 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	YPS6	P40583	537 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	SAS2	P40963	338 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	RBL2	P48606	106 aa	Known RBP	4.07	□□□□□ -1.76
KIN28	YDL108W	CDH1	P53197	566 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	MTM1	P53320	366 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	SLG1	P54867	378 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	NHP10	Q03435	203 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	CCE1	Q03702	353 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	YDR249C	Q03787	373 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	TRM12	Q04235	462 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	HNT1	Q04344	158 aa	Known RBP	4.07	□□□□□ -1.76
KIN28	YDL108W	RPS10A	Q08745	105 aa	Predicted RBP	4.07	□□□□□ -1.76
KIN28	YDL108W	SRL2	Q12020	392 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	MDM32	Q12171	622 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	YLL056C	Q12177	298 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	MEX67	Q99257	599 aa	Known RBP	4.07	□□□□□ -1.76
KIN28	YDL108W	IZH4	Q99393	312 aa		4.07	□□□□□ -1.76
KIN28	YDL108W	MET5	P47169	1442 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	PDR18	P53756	1333 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	MET2	P08465	486 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	PHO13	P19881	312 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	PHO80	P20052	293 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	YBR241C	P38142	488 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	YBR137W	P38276	179 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	MTC4	P38335	694 aa	Known RBP	4.06	□□□□□ -1.76
KIN28	YDL108W	VMA7	P39111	118 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	SMB1	P40018	196 aa	Known RBP	4.06	□□□□□ -1.76
KIN28	YDL108W	GVP36	P40531	326 aa	Known RBP	4.06	□□□□□ -1.76
KIN28	YDL108W	ERJ5	P43613	295 aa	Predicted RBP	4.06	□□□□□ -1.76
KIN28	YDL108W	RPS10B	P46784	105 aa	Known RBP	4.06	□□□□□ -1.76
KIN28	YDL108W	YJR015W	P47090	510 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	CPR7	P47103	393 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	PAC10	P48363	199 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	TRM9	P49957	279 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	MRM2	P53123	320 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	COS1	P53822	381 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	CAF40	P53829	373 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	DUG3	P53871	357 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	ACT1	P60010	375 aa	Known RBP	4.06	□□□□□ -1.76
KIN28	YDL108W	MSC1	Q03104	513 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	YMR027W	Q04371	470 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	HSP31	Q04432	237 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	YLR030W	Q07967	263 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	YLR046C	Q12253	270 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	RAX2	Q12465	1220 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	IGO2	Q9P305	131 aa		4.06	□□□□□ -1.76
KIN28	YDL108W	BUD4	P47136	1447 aa		4.05	□□□□□ -1.76
KIN28	YDL108W	SAL1	D6W196	494 aa		4.05	□□□□□ -1.76
KIN28	YDL108W	GPA2	P10823	449 aa		4.05	□□□□□ -1.76
KIN28	YDL108W	EXO70	P19658	623 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 163.7 ms