RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W HRP1Q99383 534 aaKnown RBP5.3□□□□□ -1.56
SUB2YDL084W KOG1P38873 1557 aa5.3□□□□□ -1.56
SUB2YDL084W GRX2P17695 143 aaKnown RBP5.29□□□□□ -1.56
SUB2YDL084W PRP45P28004 379 aaPredicted RBP5.29□□□□□ -1.56
SUB2YDL084W GAC1P28006 793 aa5.29□□□□□ -1.56
SUB2YDL084W SFC1P33303 322 aa5.29□□□□□ -1.56
SUB2YDL084W SHE2P36068 246 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
SUB2YDL084W OMA1P36163 345 aa5.29□□□□□ -1.56
SUB2YDL084W SAF1P38352 637 aa5.29□□□□□ -1.56
SUB2YDL084W YHR035WP38769 630 aa5.29□□□□□ -1.56
SUB2YDL084W KRE29P40026 464 aa5.29□□□□□ -1.56
SUB2YDL084W SMX2P40204 77 aaKnown RBP5.29□□□□□ -1.56
SUB2YDL084W DIM1P41819 318 aaKnown RBP5.29□□□□□ -1.56
SUB2YDL084W YJR012CP47087 207 aa5.29□□□□□ -1.56
SUB2YDL084W SKP1P52286 194 aa5.29□□□□□ -1.56
SUB2YDL084W MGA1P53050 456 aa5.29□□□□□ -1.56
SUB2YDL084W MRPL22P53881 309 aa5.29□□□□□ -1.56
SUB2YDL084W RSM23Q01163 450 aa5.29□□□□□ -1.56
SUB2YDL084W HPT1Q04178 221 aaKnown RBP5.29□□□□□ -1.56
SUB2YDL084W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
SUB2YDL084W YDL177CQ12257 170 aa5.29□□□□□ -1.56
SUB2YDL084W SPE4Q12455 300 aa5.29□□□□□ -1.56
SUB2YDL084W PDR11P40550 1411 aa5.29□□□□□ -1.56
SUB2YDL084W RHO2P06781 192 aa5.28□□□□□ -1.56
SUB2YDL084W RPL18AP0CX49 186 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W RPL18BP0CX50 186 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W ERG11P10614 530 aa5.28□□□□□ -1.56
SUB2YDL084W AMD1P15274 810 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W REC114P32841 428 aa5.28□□□□□ -1.56
SUB2YDL084W HIS7P33734 552 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W AUR1P36107 401 aaPredicted RBP5.28□□□□□ -1.56
SUB2YDL084W ASC1P38011 319 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W MBA1P38300 278 aa5.28□□□□□ -1.56
SUB2YDL084W MTC4P38335 694 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W RPS20P38701 121 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W YHL044WP38727 235 aa5.28□□□□□ -1.56
SUB2YDL084W FMP52P40008 231 aa5.28□□□□□ -1.56
SUB2YDL084W YER158CP40095 573 aa5.28□□□□□ -1.56
SUB2YDL084W YER189WP40104 122 aa5.28□□□□□ -1.56
SUB2YDL084W LYS12P40495 371 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W YFL064CP43540 174 aa5.28□□□□□ -1.56
SUB2YDL084W MNN5P46982 586 aa5.28□□□□□ -1.56
SUB2YDL084W GWT1P47026 490 aa5.28□□□□□ -1.56
SUB2YDL084W DAN1P47178 298 aa5.28□□□□□ -1.56
SUB2YDL084W NUP57P48837 541 aa5.28□□□□□ -1.56
SUB2YDL084W SCS3P53012 380 aa5.28□□□□□ -1.56
SUB2YDL084W FRE4P53746 719 aa5.28□□□□□ -1.56
SUB2YDL084W DAD3P69850 94 aa5.28□□□□□ -1.56
SUB2YDL084W YMR310CQ04867 317 aaPredicted RBP5.28□□□□□ -1.56
SUB2YDL084W YMR315WQ04869 349 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W GEP3Q08622 556 aa5.28□□□□□ -1.56
SUB2YDL084W ESC1Q03661 1658 aaKnown RBP5.28□□□□□ -1.56
SUB2YDL084W POL1P13382 1468 aa5.27□□□□□ -1.57
SUB2YDL084W YLR462WO13556 202 aa5.27□□□□□ -1.57
SUB2YDL084W GDH1P07262 454 aaKnown RBP5.27□□□□□ -1.57
SUB2YDL084W YML003WP0CF16 290 aa5.27□□□□□ -1.57
SUB2YDL084W HAP3P13434 144 aa5.27□□□□□ -1.57
SUB2YDL084W RPB5P20434 215 aa5.27□□□□□ -1.57
SUB2YDL084W TKL1P23254 680 aaKnown RBP5.27□□□□□ -1.57
SUB2YDL084W SAT4P25333 603 aaKnown RBP5.27□□□□□ -1.57
SUB2YDL084W ELO2P25358 347 aa5.27□□□□□ -1.57
SUB2YDL084W STP22P25604 385 aa5.27□□□□□ -1.57
SUB2YDL084W CDC20P26309 610 aa5.27□□□□□ -1.57
SUB2YDL084W DCG1P32460 244 aa5.27□□□□□ -1.57
SUB2YDL084W UTR4P32626 227 aa5.27□□□□□ -1.57
SUB2YDL084W SNC2P33328 115 aa5.27□□□□□ -1.57
SUB2YDL084W TOD6P34219 525 aa5.27□□□□□ -1.57
SUB2YDL084W YBR056WP38081 501 aa5.27□□□□□ -1.57
SUB2YDL084W KTR3P38130 404 aaPredicted RBP5.27□□□□□ -1.57
SUB2YDL084W RTC2P38279 296 aa5.27□□□□□ -1.57
SUB2YDL084W PHO90P39535 881 aa5.27□□□□□ -1.57
SUB2YDL084W TIR3P40552 269 aa5.27□□□□□ -1.57
SUB2YDL084W AZF1P41696 914 aa5.27□□□□□ -1.57
SUB2YDL084W ASN1P49089 572 aaKnown RBP5.27□□□□□ -1.57
SUB2YDL084W BRR6P53062 197 aa5.27□□□□□ -1.57
SUB2YDL084W MMS2P53152 137 aa5.27□□□□□ -1.57
SUB2YDL084W YGR168CP53293 376 aa5.27□□□□□ -1.57
SUB2YDL084W STP1Q00947 519 aa5.27□□□□□ -1.57
SUB2YDL084W OSH6Q02201 448 aa5.27□□□□□ -1.57
SUB2YDL084W VPS28Q02767 242 aa5.27□□□□□ -1.57
SUB2YDL084W FMN1Q03778 218 aa5.27□□□□□ -1.57
SUB2YDL084W GAL83Q04739 417 aa5.27□□□□□ -1.57
SUB2YDL084W GRX8Q05926 109 aa5.27□□□□□ -1.57
SUB2YDL084W YOR342CQ12182 319 aa5.27□□□□□ -1.57
SUB2YDL084W RDL1Q12305 139 aaKnown RBP5.27□□□□□ -1.57
SUB2YDL084W RPL13AQ12690 199 aaPredicted RBP5.27□□□□□ -1.57
SUB2YDL084W AI5_ALPHAQ9ZZX1 630 aa5.27□□□□□ -1.57
SUB2YDL084W MES1P00958 751 aaKnown RBP5.26□□□□□ -1.57
SUB2YDL084W RPL28P02406 149 aaKnown RBP5.26□□□□□ -1.57
SUB2YDL084W SGA1P08019 549 aa5.26□□□□□ -1.57
SUB2YDL084W TY1A-LR4P0C2I8 440 aaKnown RBP5.26□□□□□ -1.57
SUB2YDL084W TY1A-DR6P0CX70 440 aa5.26□□□□□ -1.57
SUB2YDL084W TY1A-ER1P0CX71 440 aa5.26□□□□□ -1.57
SUB2YDL084W TY1A-LR2P0CX72 440 aa5.26□□□□□ -1.57
SUB2YDL084W TY1A-PLP0CX73 440 aa5.26□□□□□ -1.57
SUB2YDL084W TY1A-JR1P0CX74 440 aa5.26□□□□□ -1.57
SUB2YDL084W TY1A-LR3P0CX75 440 aa5.26□□□□□ -1.57
SUB2YDL084W TY1A-ML2P0CX76 440 aa5.26□□□□□ -1.57
SUB2YDL084W TIR1P10863 254 aa5.26□□□□□ -1.57
SUB2YDL084W ERD1P16151 362 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms