RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM6	YDL077C	CRD1	Q07560	283 aa		1	□□□□□ -2.25
VAM6	YDL077C	WHI4	Q07655	649 aa	Known RBP	1	□□□□□ -2.25
VAM6	YDL077C	YPL257W	Q08974	193 aa		1	□□□□□ -2.25
VAM6	YDL077C	YLL056C	Q12177	298 aa		1	□□□□□ -2.25
VAM6	YDL077C	SVS1	Q12254	260 aa		1	□□□□□ -2.25
VAM6	YDL077C	WTM1	Q12363	437 aa	Known RBP	1	□□□□□ -2.25
VAM6	YDL077C	POM34	Q12445	299 aa		1	□□□□□ -2.25
VAM6	YDL077C	RRD2	Q12461	358 aa		1	□□□□□ -2.25
VAM6	YDL077C	YKL023C-A	Q2V2P3	75 aa		1	□□□□□ -2.25
VAM6	YDL077C	KTI11	Q3E840	82 aa		1	□□□□□ -2.25
VAM6	YDL077C	ECM29	P38737	1868 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	FLO9	P39712	1322 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	BNI1	P41832	1953 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YOR304C-A	O14468	76 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	RAD52	P06778	471 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	YBR121C-A	P0C5L4	52 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	APE1	P14904	514 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	NOP1	P15646	327 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.99	□□□□□ -2.25	RIP-Chip
VAM6	YDL077C	GRX2	P17695	143 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	STE50	P25344	346 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YCR090C	P25654	182 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	CDC20	P26309	610 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	PRO1	P32264	428 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ERG1	P32476	496 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	MKK2	P32491	506 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.99	□□□□□ -2.25	not detected
VAM6	YDL077C	COX13	P32799	129 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SOF1	P33750	489 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	MTR2	P34232	184 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	MCH2	P36032	473 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ADD66	P36040	267 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	TUL1	P36096	758 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	PRY2	P36110	329 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	UBS1	P38290	277 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SRP68	P38687	599 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	GIC1	P38785	314 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	RPF1	P38805	295 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	FAD1	P38913	306 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	GAA1	P39012	614 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	VAC8	P39968	578 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	NPP2	P39997	493 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	GAT2	P40209	560 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	FLX1	P40464	311 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	MOB1	P40484	314 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	IME4	P41833	600 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	NIT2	P47016	307 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	GWT1	P47026	490 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	XPT1	P47165	209 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	HXT16	P47185	567 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	TRM9	P49957	279 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	TAM41	P53230	385 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	VHT1	P53241	593 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YGR117C	P53270	476 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	MTM1	P53320	366 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	MEP3	P53390	489 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	INN1	P53901	409 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YPL080C	Q02826	108 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YML079W	Q03629	201 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SHH3	Q04487	196 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ROY1	Q04847	553 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ASM4	Q05166	528 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YHC1	Q05900	231 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	TAZ1	Q06510	381 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	GUD1	Q07729	489 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	TPO1	Q07824	586 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	FMP25	Q08023	583 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	INP54	Q08227	384 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	AAD15	Q08361	143 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	PEX27	Q08580	376 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ACM1	Q08981	209 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SLM3	Q12093	417 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YLR049C	Q12110	428 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	LEU9	Q12166	604 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	0.99	□□□□□ -2.25	not detected
VAM6	YDL077C	RRP42	Q12277	265 aa	Predicted RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	YOL114C	Q12322	202 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	FRE6	Q12473	712 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	TMA17	Q12513	150 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	HUT1	Q12520	339 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	MHT1	Q12525	324 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	CTF3	Q12748	733 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	COX19	Q3E731	98 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	Q0142	Q9ZZW4	58 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	GSC2	P40989	1895 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	PRC1	P00729	532 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	PAI3	P01094	68 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	FLP1	P03870	423 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	CDC9	P04819	755 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	HEM2	P05373	342 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	RPS25B	P0C0T4	108 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	AMD1	P15274	810 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	ART10	P18634	518 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	SEC22	P22214	214 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	TKL1	P23254	680 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	HYP2	P23301	157 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	LRE1	P25579	583 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	PER1	P25625	357 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ADE1	P27616	306 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	OAC1	P32332	324 aa		0.99	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms