RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C YPR147CQ06522 304 aaKnown RBP3.35□□□□□ -1.87
SHE3YBR130C SEY1Q99287 776 aa3.35□□□□□ -1.87
SHE3YBR130C SAC3P46674 1301 aa3.35□□□□□ -1.87
SHE3YBR130C THP2O13539 261 aaKnown RBP3.34□□□□□ -1.87
SHE3YBR130C RHO1P06780 209 aaKnown RBP3.34□□□□□ -1.87
SHE3YBR130C TCP1P12612 559 aaKnown RBP3.34□□□□□ -1.87
SHE3YBR130C STE18P18852 110 aa3.34□□□□□ -1.87
SHE3YBR130C RPO26P20435 155 aa3.34□□□□□ -1.87
SHE3YBR130C MRPL39P36533 70 aa3.34□□□□□ -1.87
SHE3YBR130C PGU1P47180 361 aa3.34□□□□□ -1.87
SHE3YBR130C RSM27P53305 110 aa3.34□□□□□ -1.87
SHE3YBR130C GIM3P53900 129 aa3.34□□□□□ -1.87
SHE3YBR130C ECM19Q06011 112 aa3.34□□□□□ -1.87
SHE3YBR130C GIS3Q12418 502 aa3.34□□□□□ -1.87
SHE3YBR130C FLO11P08640 1367 aa3.34□□□□□ -1.88
SHE3YBR130C AUS1Q08409 1394 aa3.34□□□□□ -1.88
SHE3YBR130C ADH1P00330 348 aaKnown RBP3.33□□□□□ -1.88
SHE3YBR130C YCR025CP25352 136 aa3.33□□□□□ -1.88
SHE3YBR130C DBP7P36120 742 aaKnown RBP3.33□□□□□ -1.88
SHE3YBR130C JHD2P47156 728 aaPredicted RBP3.33□□□□□ -1.88
SHE3YBR130C ZRG17P53735 605 aa3.33□□□□□ -1.88
SHE3YBR130C GIS2P53849 153 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SHE3YBR130C SWT21P53873 357 aaPredicted RBP3.33□□□□□ -1.88
SHE3YBR130C TSA2Q04120 196 aa3.33□□□□□ -1.88
SHE3YBR130C YMR226CQ05016 267 aaKnown RBP3.33□□□□□ -1.88
SHE3YBR130C DCR2Q05924 578 aa3.33□□□□□ -1.88
SHE3YBR130C CDC36P06100 191 aaPredicted RBP3.32□□□□□ -1.88
SHE3YBR130C ARG80P07249 177 aa3.32□□□□□ -1.88
SHE3YBR130C YKR104WP0CE69 306 aa3.32□□□□□ -1.88
SHE3YBR130C MID2P36027 376 aa3.32□□□□□ -1.88
SHE3YBR130C MIC12P38341 106 aa3.32□□□□□ -1.88
SHE3YBR130C SEO1P39709 593 aa3.32□□□□□ -1.88
SHE3YBR130C YGR067CP53243 804 aa3.32□□□□□ -1.88
SHE3YBR130C FMP41P53889 259 aaKnown RBP3.32□□□□□ -1.88
SHE3YBR130C AAH1P53909 347 aa3.32□□□□□ -1.88
SHE3YBR130C ECM11Q04110 302 aa3.32□□□□□ -1.88
SHE3YBR130C YAL063C-AQ3E791 96 aa3.32□□□□□ -1.88
SHE3YBR130C YOL085CQ99345 113 aa3.32□□□□□ -1.88
SHE3YBR130C YBR121C-AP0C5L4 52 aa3.31□□□□□ -1.88
SHE3YBR130C HMT1P38074 348 aa3.31□□□□□ -1.88
SHE3YBR130C YHL049CP38722 271 aa3.31□□□□□ -1.88
SHE3YBR130C YHL044WP38727 235 aa3.31□□□□□ -1.88
SHE3YBR130C YHR127WP38833 243 aaKnown RBP3.31□□□□□ -1.88
SHE3YBR130C BDH1P39714 382 aa3.31□□□□□ -1.88
SHE3YBR130C SYS1P41544 203 aa3.31□□□□□ -1.88
SHE3YBR130C YGR018CP53211 109 aa3.31□□□□□ -1.88
SHE3YBR130C ACT1P60010 375 aaKnown RBP3.31□□□□□ -1.88
SHE3YBR130C SPG4Q04438 115 aa3.31□□□□□ -1.88
SHE3YBR130C ATG38Q05789 226 aaKnown RBP3.31□□□□□ -1.88
SHE3YBR130C SSQ1Q05931 657 aaPredicted RBP3.31□□□□□ -1.88
SHE3YBR130C RRP40Q08285 240 aaKnown RBP3.31□□□□□ -1.88
SHE3YBR130C TIR4Q12218 487 aaPredicted RBP3.31□□□□□ -1.88
SHE3YBR130C YEL009C-AA0A023PZF2 135 aa3.3□□□□□ -1.88
SHE3YBR130C FUS3P16892 353 aaKnown RBP3.3□□□□□ -1.88
SHE3YBR130C YMR31P19955 123 aa3.3□□□□□ -1.88
SHE3YBR130C COX10P21592 462 aa3.3□□□□□ -1.88
SHE3YBR130C YCR102CP25608 368 aa3.3□□□□□ -1.88
SHE3YBR130C PRP18P33411 251 aaPredicted RBP3.3□□□□□ -1.88
SHE3YBR130C YOX1P34161 385 aa3.3□□□□□ -1.88
SHE3YBR130C DRE2P36152 348 aa3.3□□□□□ -1.88
SHE3YBR130C SSH1P38353 490 aaKnown RBP3.3□□□□□ -1.88
SHE3YBR130C MRPS17Q03246 237 aaPredicted RBP3.3□□□□□ -1.88
SHE3YBR130C TLG1Q03322 224 aa3.3□□□□□ -1.88
SHE3YBR130C GOT1Q03554 138 aa3.3□□□□□ -1.88
SHE3YBR130C YDR124WQ04608 324 aa3.3□□□□□ -1.88
SHE3YBR130C LOA1Q06508 300 aa3.3□□□□□ -1.88
SHE3YBR130C COQ10Q08058 207 aa3.3□□□□□ -1.88
SHE3YBR130C PLB3Q08108 686 aa3.3□□□□□ -1.88
SHE3YBR130C CUP2P15315 225 aa3.29□□□□□ -1.88
SHE3YBR130C CPT1P17898 393 aa3.29□□□□□ -1.88
SHE3YBR130C DPB2P24482 689 aaPredicted RBP3.29□□□□□ -1.88
SHE3YBR130C BMH1P29311 267 aaKnown RBP3.29□□□□□ -1.88
SHE3YBR130C RIB1P38066 345 aa3.29□□□□□ -1.88
SHE3YBR130C GOS1P38736 223 aa3.29□□□□□ -1.88
SHE3YBR130C YHB1P39676 399 aaKnown RBP3.29□□□□□ -1.88
SHE3YBR130C YMR144WP40214 342 aaKnown RBP3.29□□□□□ -1.88
SHE3YBR130C RFC4P40339 323 aaKnown RBP3.29□□□□□ -1.88
SHE3YBR130C SNZ3P43545 298 aa3.29□□□□□ -1.88
SHE3YBR130C UFD1P53044 361 aa3.29□□□□□ -1.88
SHE3YBR130C FLC3P53121 802 aa3.29□□□□□ -1.88
SHE3YBR130C TVP15Q03860 143 aa3.29□□□□□ -1.88
SHE3YBR130C SYC1Q08553 188 aaPredicted RBP3.29□□□□□ -1.88
SHE3YBR130C YDL211CQ12121 372 aa3.29□□□□□ -1.88
SHE3YBR130C NOP1P15646 327 aaKnown RBP3.28□□□□□ -1.88
SHE3YBR130C CDC10P25342 322 aaKnown RBP3.28□□□□□ -1.88
SHE3YBR130C RPB9P27999 122 aa3.28□□□□□ -1.88
SHE3YBR130C GDH2P33327 1092 aaKnown RBP3.28□□□□□ -1.88
SHE3YBR130C CSG2P35206 410 aa3.28□□□□□ -1.88
SHE3YBR130C RAD17P48581 401 aa3.28□□□□□ -1.88
SHE3YBR130C MIC26P50087 233 aa3.28□□□□□ -1.88
SHE3YBR130C MRH4P53166 561 aa3.28□□□□□ -1.88
SHE3YBR130C SNZ2P53824 298 aa3.28□□□□□ -1.88
SHE3YBR130C SMD1Q02260 146 aaPredicted RBP3.28□□□□□ -1.88
SHE3YBR130C HEM25Q07534 307 aa3.28□□□□□ -1.88
SHE3YBR130C GET4Q12125 312 aa3.28□□□□□ -1.88
SHE3YBR130C IES3Q12345 250 aa3.28□□□□□ -1.88
SHE3YBR130C YBL008W-AQ3E821 79 aa3.28□□□□□ -1.88
SHE3YBR130C NUP157P40064 1391 aaKnown RBP3.27□□□□□ -1.89
SHE3YBR130C IDH1P28834 360 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SHE3YBR130C CBT1P36038 271 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms