RNA–Protein interactions for RNA: YAL023C

PMT2, Transcript of Protein O-mannosyltransferase of the ER membrane, yeast

Gene PMT2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMT2	YAL023C	AHC2	P25649	128 aa		4.9	□□□□□ -1.62
PMT2	YAL023C	TIP1	P27654	210 aa	Predicted RBP	4.9	□□□□□ -1.62
PMT2	YAL023C	PRO3	P32263	286 aa	Known RBP	4.9	□□□□□ -1.62
PMT2	YAL023C	SOL2	P37262	315 aa		4.9	□□□□□ -1.62
PMT2	YAL023C	YBR013C	P38215	129 aa		4.9	□□□□□ -1.62
PMT2	YAL023C	ARC40	P38328	384 aa	Known RBP	4.9	□□□□□ -1.62
PMT2	YAL023C	SOP4	P39543	234 aa	Predicted RBP	4.9	□□□□□ -1.62
PMT2	YAL023C	PTI1	P39927	425 aa	Predicted RBP	4.9	□□□□□ -1.62
PMT2	YAL023C	POP6	P53218	158 aa		4.9	□□□□□ -1.62
PMT2	YAL023C	YDR415C	Q04033	374 aa	Predicted RBP	4.9	□□□□□ -1.62
PMT2	YAL023C	SEN15	Q04675	128 aa		4.9	□□□□□ -1.62
PMT2	YAL023C	REX4	Q08237	289 aa		4.9	□□□□□ -1.62
PMT2	YAL023C	RRP40	Q08285	240 aa	Known RBP	4.9	□□□□□ -1.62
PMT2	YAL023C	APC9	Q12107	265 aa		4.9	□□□□□ -1.62
PMT2	YAL023C	RPS1B	P23248	255 aa	Known RBP	4.9	□□□□□ -1.63
PMT2	YAL023C	PRE7	P23724	241 aa	Known RBP	4.9	□□□□□ -1.63
PMT2	YAL023C	DBR1	P24309	405 aa	Known RBP	4.9	□□□□□ -1.63
PMT2	YAL023C	DAL2	P25335	343 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	YCR043C	P25361	127 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	SPR1	P32603	445 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	RPS1A	P33442	255 aa	Known RBP	4.9	□□□□□ -1.63
PMT2	YAL023C	SSS1	P35179	80 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	ASK1	P35734	292 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	RIM2	P38127	377 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	YHR122W	P38829	231 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	AGP3	P43548	558 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	IKS1	P47042	667 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	SSU72	P53538	206 aa	Predicted RBP	4.9	□□□□□ -1.63
PMT2	YAL023C	YHC1	Q05900	231 aa	Known RBP	4.9	□□□□□ -1.63
PMT2	YAL023C	YPR127W	Q06494	345 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	MFG1	Q07684	458 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	PCC1	Q3E833	88 aa		4.9	□□□□□ -1.63
PMT2	YAL023C	AVT5	P38176	459 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	MMS21	P38632	267 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	NSG1	P38837	291 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	MST28	P39552	234 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	BUD13	P46947	266 aa	Predicted RBP	4.89	□□□□□ -1.63
PMT2	YAL023C	NBP35	P52920	328 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	YOP1	Q12402	180 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	YKL162C	P36052	402 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	MOG1	P47123	218 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	ADO1	P47143	340 aa	Known RBP	4.89	□□□□□ -1.63
PMT2	YAL023C	YGL204C	P53089	101 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	GET1	P53192	235 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	BIO4	P53630	237 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	SLM2	P53955	656 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	RHO3	Q00245	231 aa	Known RBP	4.89	□□□□□ -1.63
PMT2	YAL023C	YPL113C	Q02961	396 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	CDC123	Q05791	360 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	PEX27	Q08580	376 aa		4.89	□□□□□ -1.63
PMT2	YAL023C	EFG1	Q3E705	233 aa	Known RBP	4.89	□□□□□ -1.63
PMT2	YAL023C	ADH2	P00331	348 aa	Known RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	SSA3	P09435	649 aa	Known RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	YAR066W	P0CX18	203 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	YHR214W	P0CX19	203 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	GRR1	P24814	1151 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	DCC1	P25559	380 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	POF1	P25576	258 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	SRB6	P32570	121 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	ECM8	P38246	354 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	SHE3	P38272	425 aa	Known RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	MTC4	P38335	694 aa	Known RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	RPR2	P40571	144 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	GAB1	P41733	394 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	TIM18	Q08749	192 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	CDC36	P06100	191 aa	Predicted RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	PRE1	P22141	198 aa	Known RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	SHO1	P40073	367 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	TES1	P41903	349 aa	Known RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	MRH4	P53166	561 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	RPL22B	P56628	122 aa	Known RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	YPL080C	Q02826	108 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	ECM18	Q04623	453 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	NEJ1	Q06148	342 aa		4.88	□□□□□ -1.63
PMT2	YAL023C	YLR179C	Q06252	201 aa	Known RBP	4.88	□□□□□ -1.63
PMT2	YAL023C	UBC8	P28263	218 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PMT2	YAL023C	PDC2	P32896	925 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	SRY1	P36007	326 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	HIS2	P38635	335 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	END3	P39013	349 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	RPL10	P41805	221 aa	Known RBP	4.87	□□□□□ -1.63
PMT2	YAL023C	SPG5	P42933	373 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	YAE1	P47118	141 aa	Predicted RBP	4.87	□□□□□ -1.63
PMT2	YAL023C	SCW4	P53334	386 aa	Known RBP	4.87	□□□□□ -1.63
PMT2	YAL023C	TVP18	Q04767	167 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	GAS2	Q06135	555 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	AAD15	Q08361	143 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	AYT1	Q12226	474 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	RBD2	Q12270	262 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	FSH3	Q99369	266 aa		4.87	□□□□□ -1.63
PMT2	YAL023C	HEM2	P05373	342 aa		4.86	□□□□□ -1.63
PMT2	YAL023C	RPL9A	P05738	191 aa	Known RBP	4.86	□□□□□ -1.63
PMT2	YAL023C	CDC42	P19073	191 aa		4.86	□□□□□ -1.63
PMT2	YAL023C	MUD1	P32605	298 aa	Known RBP	4.86	□□□□□ -1.63
PMT2	YAL023C	ZRT3	P34240	503 aa		4.86	□□□□□ -1.63
PMT2	YAL023C	FMP23	P38231	175 aa		4.86	□□□□□ -1.63
PMT2	YAL023C	URA8	P38627	578 aa	Predicted RBP	4.86	□□□□□ -1.63
PMT2	YAL023C	IKI1	P38874	309 aa		4.86	□□□□□ -1.63
PMT2	YAL023C	PAN6	P40459	309 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 86.5 ms