RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PTK2Q05397 1052 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 DCTN2Q13561 401 aaKnown RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 CFAP157Q5JU67 520 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 H2AFVQ71UI9 128 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 ADGRG6Q86SQ4 1221 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 ZC3H3Q8IXZ2 948 aaKnown RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 LCORLQ8N3X6 602 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 FAM133AQ8N9E0 248 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 SPIRE2Q8WWL2 714 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 CYLDQ9NQC7 956 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 FAIMQ9NVQ4 179 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 TUBA8Q9NY65 449 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 BIN2Q9UBW5 565 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 PHTF1Q9UMS5 762 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 CBX6O95503 412 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 SLC5A1P13866 664 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 FGFR2P21802 821 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 MLH1P40692 756 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 RAP1GDS1P52306 607 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 ZNF449Q6P9G9 518 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 ZNF571Q7Z3V5 609 aaPredicted RBP12.81□□□□□ -0.36
CAPN3-221ENST00000638141 MAP7D3Q8IWC1 876 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 TRIM59Q8IWR1 403 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 ARHGAP24Q8N264 748 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 UBN1Q9NPG3 1134 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 ZFP69BQ9UJL9 534 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 MROH5Q6ZUA9 1318 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 SYNGAP1Q96PV0 1343 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
CAPN3-221ENST00000638141 SHANK3Q9BYB0 1731 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 ALDH2P05091 517 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 ETS2P15036 469 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 CTNNA2P26232 953 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 NEK3P51956 506 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 XIAPP98170 497 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 LONRF1Q17RB8 773 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 CERKLQ49MI3 558 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 UBAP2Q5T6F2 1119 aaKnown RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 DCAF12L1Q5VU92 463 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 CCDC125Q86Z20 511 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 SCUBE1Q8IWY4 988 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 CCDC65Q8IXS2 484 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 ANKRD35Q8N283 1001 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 ERMNQ8TAM6 284 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 GLG1Q92896 1179 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 PTCD3Q96EY7 689 aaKnown RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 DDX50Q9BQ39 737 aaKnown RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 BHMT2Q9H2M3 363 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 ERVK-5Q9HDB9 667 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 COL1A1P02452 1464 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 FRMPD4Q14CM0 1322 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 FAM47DPA6NHR8 397 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 A6NJR5 290 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 PPATQ06203 517 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 NR1H3Q13133 447 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 CYP1B1Q16678 543 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 CLNKQ7Z7G1 428 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 PHLDB2Q86SQ0 1253 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 SLC15A3Q8IY34 581 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 NUP93Q8N1F7 819 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 GAB3Q8WWW8 586 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 CDC42EP4Q9H3Q1 356 aaKnown RBP12.8□□□□□ -0.36
CAPN3-221ENST00000638141 FAM205AQ6ZU69 1335 aa12.8□□□□□ -0.36
CAPN3-221ENST00000638141 hCG_1642624A0A1W2PR95 340 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 TPD52L2O43399 206 aaKnown RBP12.79□□□□□ -0.36
CAPN3-221ENST00000638141 PRKAB2O43741 272 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 CDK4P11802 303 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 HOXD12P35452 270 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 PDK4Q16654 411 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.79□□□□□ -0.36
CAPN3-221ENST00000638141 TAF1BQ53T94 588 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-221ENST00000638141 FAM91A1Q658Y4 838 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 IZUMO2Q6UXV1 221 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 OTUD6AQ7L8S5 288 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 KRT27Q7Z3Y8 459 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 GPIHBP1Q8IV16 184 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 ZBED8Q8IZ13 594 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 MYOCDQ8IZQ8 938 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 FNDC8Q8TC99 324 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 FAM81BQ96LP2 452 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 FNBP1Q96RU3 617 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 EURLQ9NYK6 297 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 KANSL1LA0AUZ9 987 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 TMEM247A6NEH6 219 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 FAM196BA6NMK8 535 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 HGSO14964 777 aaPredicted RBP12.79□□□□□ -0.36
CAPN3-221ENST00000638141 PLSCR1O15162 318 aa12.79□□□□□ -0.36
CAPN3-221ENST00000638141 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.36
CAPN3-221ENST00000638141 EXOC3O60645 756 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms