RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SSU72P8A0A1W2PR75 194 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 MYMKA6NI61 221 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 SERPINB7O75635 380 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 DCTN3O75935 186 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 PDE5AO76074 875 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 IFNAR2P48551 515 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 PMS2P54278 862 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 NONOQ15233 471 aaKnown RBP eCLIP8□□□□□ -1.13
TRIM49B-202ENST00000622138 WDR72Q3MJ13 1102 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 ZCWPW2Q504Y3 356 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 MFSD5Q6N075 450 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 SLC2A7Q6PXP3 512 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 C4orf50Q6ZRC1 276 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 ACAD11Q709F0 780 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 PATL1Q86TB9 770 aaKnown RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 FAM186BQ8IYM0 893 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 ZBED8Q8IZ13 594 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 PIP4K2CQ8TBX8 421 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 NRG4Q8WWG1 115 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 CKAP2Q8WWK9 683 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 GAB3Q8WWW8 586 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 MYLK2Q9H1R3 596 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 PABPC3Q9H361 631 aaKnown RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 AZI2Q9H6S1 392 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 FAM207AQ9NSI2 230 aaPredicted RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 SCHIP1Q9P0W5 487 aaPredicted RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 SALL4Q9UJQ4 1053 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 ANGPTL2Q9UKU9 493 aa8□□□□□ -1.13
TRIM49B-202ENST00000622138 FAM32AQ9Y421 112 aaKnown RBP8□□□□□ -1.13
TRIM49B-202ENST00000622138 BICDL2A1A5D9 508 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 SMCO2A6NFE2 343 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 BOLA2-SMG1P6H3BVE0 249 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 RBAK-RBAKDNI3L0D1 243 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 LAD1O00515 517 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 SLC37A4O43826 429 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 PSMG1O95456 288 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 LDHBP07195 334 aaKnown RBP7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 PTPN4P29074 926 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 CA8P35219 290 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 FLT3P36888 993 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 EIF4A3P38919 411 aaKnown RBP7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 DSG1Q02413 1049 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 MAP3K10Q02779 954 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 MGAT5Q09328 741 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 MTFR1Q15390 333 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 SYCP2LQ5T4T6 812 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 KRT25Q7Z3Z0 450 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 KCNK18Q7Z418 384 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 NEK8Q86SG6 692 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 ECHDC2Q86YB7 292 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 C2CD5Q86YS7 1000 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 TBCKQ8TEA7 893 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 ATP6V0A1Q93050 837 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 PIGSQ96S52 555 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 SH3GL1Q99961 368 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 NUDT12Q9BQG2 462 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 CDCA7Q9BWT1 371 aaPredicted RBP7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 SPZ1Q9BXG8 430 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 MAK16Q9BXY0 300 aaKnown RBP7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 RTFDC1Q9BY42 306 aaPredicted RBP7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 ANKRD2Q9GZV1 360 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 CUEDC2Q9H467 287 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 MAGEF1Q9HAY2 307 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 VAT1LQ9HCJ6 419 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 TCP11L1Q9NUJ3 509 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 USP40Q9NVE5 1235 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 UBAP1Q9NZ09 502 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 STXBP5LQ9Y2K9 1186 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 SPO11Q9Y5K1 396 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 AHDC1Q5TGY3 1603 aaPredicted RBP7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 SPATA31A5Q5VU36 1347 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 SPATA31A7Q8IWB4 1347 aa7.99□□□□□ -1.13
TRIM49B-202ENST00000622138 E9PBE3 544 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 PGRMC1O00264 195 aaKnown RBP7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 NDUFB5O43674 189 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 ENTPD5O75356 428 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 TPPPO94811 219 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 TDP2O95551 362 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 GSTT2P0CG29 244 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 GSTT2BP0CG30 244 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 CDK4P11802 303 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 EPHB2P29323 1055 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 ATP5DP30049 168 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 TCF7P36402 384 aaPredicted RBP7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 GALK1P51570 392 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 CLCN2P51788 898 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 RPL26P61254 145 aaKnown RBP7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 SF3A3Q12874 501 aaKnown RBP eCLIP7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 GRM2Q14416 872 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 KIF22Q14807 665 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 NFIXQ14938 502 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 CENPPQ6IPU0 288 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 Q6ZNX1 250 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 LRRC55Q6ZSA7 311 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 ARHGAP27Q6ZUM4 889 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 DYMQ7RTS9 669 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 TMC4Q7Z404 712 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 TRIM50Q86XT4 487 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 BBS5Q8N3I7 341 aa7.98□□□□□ -1.13
TRIM49B-202ENST00000622138 ANKRD13CQ8N6S4 541 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms