RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 RNF19AQ9NV58 838 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 HSPBP1Q9NZL4 362 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 KLHL14Q9P2G3 628 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 CNOT8Q9UFF9 292 aaKnown RBP9.71□□□□□ -0.86
GGA3-222ENST00000621217 RGS17Q9UGC6 210 aaPredicted RBP9.71□□□□□ -0.86
GGA3-222ENST00000621217 FBXO40Q9UH90 709 aa9.71□□□□□ -0.86
GGA3-222ENST00000621217 KLRG2A4D1S0 409 aaPredicted RBP9.7□□□□□ -0.86
GGA3-222ENST00000621217 GRID2IPA4D2P6 1211 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
GGA3-222ENST00000621217 SGO2Q562F6 1265 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 CBWD2Q8IUF1 395 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 CCDC110Q8TBZ0 833 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 TUFT1Q9NNX1 390 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 DONSONQ9NYP3 566 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 PARP2Q9UGN5 583 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 NHSL1Q5SYE7 1610 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 MYH10P35580 1976 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 TOGARAM1Q9Y4F4 1720 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 M0R2N6 131 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 PPP1R12AO14974 1030 aaPredicted RBP9.7□□□□□ -0.86
GGA3-222ENST00000621217 TBX3O15119 743 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 RFC1P35251 1148 aaPredicted RBP9.7□□□□□ -0.86
GGA3-222ENST00000621217 ZNF131P52739 623 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 SLC12A3P55017 1021 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 LIN9Q5TKA1 542 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 CAPRIN2Q6IMN6 1127 aaKnown RBP9.7□□□□□ -0.86
GGA3-222ENST00000621217 BAP1Q92560 729 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 KAT5Q92993 513 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.7□□□□□ -0.869e-7■■■■□ 19.3
GGA3-222ENST00000621217 ADPGKQ9BRR6 497 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 SYT17Q9BSW7 474 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 HOMER3Q9NSC5 361 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 APEX2Q9UBZ4 518 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 IQCA1LA6NCM1 817 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 CREB3O43889 395 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 PPFIA2O75334 1257 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 MAGOHP61326 146 aaKnown RBP9.7□□□□□ -0.86
GGA3-222ENST00000621217 SCYL2Q6P3W7 929 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 TMEM270Q6UE05 265 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 SIAH1Q8IUQ4 282 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 MCPH1Q8NEM0 835 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 CASKIN2Q8WXE0 1202 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 CPA5Q8WXQ8 436 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 NUP85Q9BW27 656 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 PXMP2Q9NR77 195 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 PNMA2Q9UL42 364 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 TTC7AQ9ULT0 858 aaPredicted RBP9.7□□□□□ -0.86
GGA3-222ENST00000621217 ZNF148Q9UQR1 794 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 NID2Q14112 1375 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 DUOX1Q9NRD9 1551 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 LAMB4A4D0S4 1761 aa9.7□□□□□ -0.86
GGA3-222ENST00000621217 PIK3R2O00459 728 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 ATP2A1O14983 1001 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 DESP17661 470 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 CORO7P57737 925 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 PGM5Q15124 567 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 MAPK6Q16659 721 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 CBWD6Q4V339 395 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 CBWD3Q5JTY5 395 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 CBWD5Q5RIA9 395 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 AADACL2Q6P093 401 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 GPC2Q8N158 579 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 PSPC1Q8WXF1 523 aaKnown RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 DHX38Q92620 1227 aaKnown RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 RNF25Q96BH1 459 aaPredicted RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 TAF1DQ9H5J8 278 aaPredicted RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 SCOCQ9UIL1 159 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 PNMA3Q9UL41 463 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 NUP188Q5SRE5 1749 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 NWD2Q9ULI1 1742 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 TUBGCP6Q96RT7 1819 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 POC1B-GALNT4F8VUJ3 575 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 TLR2O60603 784 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 SFNP31947 248 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 AMPD2Q01433 879 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 TAF1CQ15572 869 aaPredicted RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 ZNF568Q3ZCX4 644 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 FYB2Q5VWT5 728 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 TSEN2Q8NCE0 465 aaKnown RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 SLC35C1Q96A29 364 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 KLHL29Q96CT2 875 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 MOV10L1Q9BXT6 1211 aaKnown RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 VPS37BQ9H9H4 285 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 RRAGCQ9HB90 399 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 BATF3Q9NR55 127 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 RNF14Q9UBS8 474 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 CPA4Q9UI42 421 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.69□□□□□ -0.86
GGA3-222ENST00000621217 SIPA1L3O60292 1781 aaPredicted RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 PITPNM2Q9BZ72 1349 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 TNNC2P02585 160 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 SPATA31C1P0DKV0 1188 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 FGFR4P22455 802 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 TCF7P36402 384 aaPredicted RBP9.69□□□□□ -0.86
GGA3-222ENST00000621217 DLG4P78352 724 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 FIGNQ5HY92 759 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 TREML2Q5T2D2 321 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 ALS2CLQ60I27 953 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.69□□□□□ -0.86
GGA3-222ENST00000621217 USP38Q8NB14 1042 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms