RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 WWC2Q6AWC2 1192 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 RALGPS2Q86X27 583 aaPredicted RBP5.14□□□□□ -1.59
SNCA-213ENST00000618500 CAMKK1Q8N5S9 505 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 ZMYND12Q9H0C1 365 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 GABBR1Q9UBS5 961 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 PCDHB8Q9UN66 801 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 LHX6Q9UPM6 363 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 PCDHB13Q9Y5F0 798 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 RALGAPA1Q6GYQ0 2036 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 DMXL1Q9Y485 3027 aa5.14□□□□□ -1.59
SNCA-213ENST00000618500 GVINP1Q7Z2Y8 2422 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 USP24Q9UPU5 2620 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 ZDBF2Q9HCK1 2354 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 CYP21A2P08686 494 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 ITGA4P13612 1032 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 HOXA11P31270 313 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 USP11P51784 963 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 FCHO2Q0JRZ9 810 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 FAM187BQ17R55 369 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 TWF2Q6IBS0 349 aaKnown RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 TAS1R1Q7RTX1 841 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 RALYLQ86SE5 291 aaKnown RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 LNX1Q8TBB1 728 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 CCDC12Q8WUD4 166 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 FAM3CQ92520 227 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 C22orf23Q9BZE7 217 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 CSRNP2Q9H175 543 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 ZNF334Q9HCZ1 680 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 PIN4Q9Y237 131 aaKnown RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 CACNA1HO95180 2353 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 WDR27A2RRH5 827 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 ARL5CA6NH57 179 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 E9PAM4 449 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 CHADO15335 359 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 RFPL2O75678 378 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 PLEKHA8P1O95397 391 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 SATB1Q01826 763 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 HSP90AA2PQ14568 343 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 NOTUMQ6P988 496 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 PLEKHM2Q8IWE5 1019 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 METTL13Q8N6R0 699 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 C12orf50Q8NA57 414 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 EXOC6Q8TAG9 804 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 BICD2Q8TD16 824 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 RUFY2Q8WXA3 655 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 CLSTN3Q9BQT9 956 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 PI4K2AQ9BTU6 479 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 DHX33Q9H6R0 707 aaKnown RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 HSFX1Q9UBD0 423 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 EBF1Q9UH73 591 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 ZFHX4Q86UP3 3567 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 SPTBN4Q9H254 2564 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 PTPRDP23468 1912 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 C1QTNF9BB2RNN3 333 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 RHOBTB1O94844 696 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 C8AP07357 584 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 C1QTNF9P0C862 333 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 HOXB3P14651 431 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 NUCB1Q02818 461 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 PABPC1LQ4VXU2 614 aaKnown RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 GRASPQ7Z6J2 395 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 PIP4P1Q86T03 277 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 MFSD6LQ8IWD5 586 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 FBXL16Q8N461 479 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 ZCCHC14Q8WYQ9 949 aaKnown RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 ASB16Q96NS5 453 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 TTPALQ9BTX7 342 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 RPP25Q9BUL9 199 aaKnown RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 TEKT3Q9BXF9 490 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 SENP2Q9HC62 589 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 SH3GLB2Q9NR46 395 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 DISC1Q9NRI5 854 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 SUCLA2Q9P2R7 463 aaPredicted RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 DNMT3BQ9UBC3 853 aaKnown RBP5.13□□□□□ -1.59
SNCA-213ENST00000618500 IPPQ9Y573 584 aa5.13□□□□□ -1.59
SNCA-213ENST00000618500 C5orf42Q9H799 3197 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 A0A087WZ62 844 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 TSPAN1O60635 241 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 ATG13O75143 517 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PSMD10O75832 226 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 ABLIM3O94929 683 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PTPN2P17706 415 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 CA8P35219 290 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 HOXD12P35452 270 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 AK2P54819 239 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PLD1Q13393 1074 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 PDAP1Q13442 181 aaKnown RBP5.12□□□□□ -1.59
SNCA-213ENST00000618500 TUSC3Q13454 348 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 NAB2Q15742 525 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 AMHR2Q16671 573 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 SPDYCQ5MJ68 293 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 C20orf194Q5TEA3 1177 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 DAB2IPQ5VWQ8 1189 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 TPGS2Q68CL5 300 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 SLC8B1Q6J4K2 584 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 CATSPER4Q7RTX7 472 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 CKAP2LQ8IYA6 745 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 TCEAL8Q8IYN2 117 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 ITFG1Q8TB96 612 aa5.12□□□□□ -1.59
SNCA-213ENST00000618500 LPPQ93052 612 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms