RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 KCNK9Q9NPC2 374 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 TCRBV7S2A1N4TA0A589 114 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 CDH16O75309 829 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 UNC5CO95185 931 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 HOXA10P31260 410 aaPredicted RBP23.92■■□□□ 1.42
SHANK2-220ENST00000608988 STAT4Q14765 748 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 SGO2Q562F6 1265 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 CMPK2Q5EBM0 449 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 TRAPPC3LQ5T215 181 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 FITM2Q8N6M3 262 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 TEX9Q8N6V9 391 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 MGARPQ8TDB4 240 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 ZNF570Q96NI8 536 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 PCDHB18PQ96TA0 734 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 IKZF4Q9H2S9 585 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 ASIC3Q9UHC3 531 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 TP73O15350 636 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 DIAPH2O60879 1101 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 ACSL3O95573 720 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 IL9RQ01113 521 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 SATB1Q01826 763 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 CDC42EP5Q6NZY7 148 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 ANKRD35Q8N283 1001 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 AGGF1Q8N302 714 aaeCLIP23.91■■□□□ 1.421e-7■■■■■ 39.8
SHANK2-220ENST00000608988 UBN1Q9NPG3 1134 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 ADAM22Q9P0K1 906 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 CCNL1Q9UK58 526 aaPredicted RBP23.91■■□□□ 1.42
SHANK2-220ENST00000608988 CORO1CQ9ULV4 474 aaPredicted RBP23.91■■□□□ 1.42
SHANK2-220ENST00000608988 SYNPO2Q9UMS6 1093 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 BTAF1O14981 1849 aa23.91■■□□□ 1.42
SHANK2-220ENST00000608988 RBBP6Q7Z6E9 1792 aaKnown RBP23.9■■□□□ 1.42
SHANK2-220ENST00000608988 ABHD2P08910 425 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 CENPCQ03188 943 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 SPDYAQ5MJ70 313 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 CFAP61Q8NHU2 1237 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 CRAMP1Q96RY5 1269 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 EHMT1Q9H9B1 1298 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 RPL26L1Q9UNX3 145 aaKnown RBP23.9■■□□□ 1.42
SHANK2-220ENST00000608988 TAF1LQ8IZX4 1826 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 MAGEB2O15479 319 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 THAP12O43422 761 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 IVDP26440 423 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 KCNJ1P48048 391 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 SLC18A1P54219 525 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 MFAP3P55082 362 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 RASA3Q14644 834 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 CERKLQ49MI3 558 aaPredicted RBP23.9■■□□□ 1.42
SHANK2-220ENST00000608988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.9■■□□□ 1.42
SHANK2-220ENST00000608988 OTUD6AQ7L8S5 288 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 NOP9Q86U38 636 aaKnown RBP23.9■■□□□ 1.42
SHANK2-220ENST00000608988 ANKRD42Q8N9B4 389 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 TMEM237Q96Q45 408 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 STARD13Q9Y3M8 1113 aa23.9■■□□□ 1.42
SHANK2-220ENST00000608988 C6orf229H3BNL8 230 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 ATF2P15336 505 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 GRIK3Q13003 919 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 TMEM179Q6ZVK1 233 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 APLFQ8IW19 511 aaPredicted RBP23.89■■□□□ 1.41
SHANK2-220ENST00000608988 SH3TC2Q8TF17 1288 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 ZNF653Q96CK0 615 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 FAM81BQ96LP2 452 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 ACCSQ96QU6 501 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 LRMDAQ9H2I8 198 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 KCNQ5Q9NR82 932 aa23.89■■□□□ 1.41
SHANK2-220ENST00000608988 F5H6K3 240 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 SMNDC1O75940 238 aaKnown RBP eCLIP23.88■■□□□ 1.41
SHANK2-220ENST00000608988 SGPL1O95470 568 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 ICA1Q05084 483 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 SETDB1Q15047 1291 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 RGS9BPQ6ZS82 235 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 KSR1Q8IVT5 923 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 LARGE2Q8N3Y3 721 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 SHC3Q92529 594 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 INPP5DQ92835 1189 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 TEKT1Q969V4 418 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 NINJ2Q9NZG7 142 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 ANAPC5Q9UJX4 755 aa23.88■■□□□ 1.41
SHANK2-220ENST00000608988 ARHGEF35A5YM69 484 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 ADRA2BP18089 450 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 SLC1A1P43005 524 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 FMO1Q01740 532 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 CDR2Q01850 454 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 PPP3CAQ08209 521 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 SF3A3Q12874 501 aaKnown RBP eCLIP23.87■■□□□ 1.413e-6■■□□□ 14.2
SHANK2-220ENST00000608988 BLMHQ13867 455 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 USH1GQ495M9 461 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 ATL2Q8NHH9 583 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 CYP2W1Q8TAV3 490 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 KIFAP3Q92845 792 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 WDR18Q9BV38 432 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 PNMA3Q9UL41 463 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 CLDN3O15551 220 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 RAD21O60216 631 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 GAS7O60861 476 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 DLATP10515 647 aaKnown RBP23.87■■□□□ 1.41
SHANK2-220ENST00000608988 TAC1P20366 129 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 CHKAP35790 457 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 ITGA8P53708 1063 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 PTP4A2Q12974 167 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 ANKRD20A2Q5SQ80 823 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms