RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 KARSQ15046 597 aaKnown RBP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 SNX21Q969T3 373 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 TARS2Q9BW92 718 aaKnown RBP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 ZSCAN16Q9H4T2 348 aaPredicted RBP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 TOPORSQ9NS56 1045 aaPredicted RBP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 LARSQ9P2J5 1176 aaKnown RBP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 MUC3AQ02505 3323 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 C19orf67A6NJJ6 358 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 TBCAO75347 108 aaKnown RBP16.05■□□□□ 0.16
XRCC1-208ENST00000598422 TADA2AO75478 443 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 FAM13AO94988 1023 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 HARSP12081 509 aaKnown RBP16.05■□□□□ 0.16
XRCC1-208ENST00000598422 ALADP13716 330 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-208ENST00000598422 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-208ENST00000598422 HSP90AA2PQ14568 343 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-208ENST00000598422 CBX2Q14781 532 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-208ENST00000598422 FUT10Q6P4F1 479 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 SYCE2Q6PIF2 218 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 ELMSAN1Q6PJG2 1045 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 ZBTB33Q86T24 672 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 SUSD6Q92537 303 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 RAD54LQ92698 747 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 BICD1Q96G01 975 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 ACO2Q99798 780 aaKnown RBP16.05■□□□□ 0.16
XRCC1-208ENST00000598422 PHF7Q9BWX1 381 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-208ENST00000598422 CDT1Q9H211 546 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 EPHX3Q9H6B9 360 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 ANKFY1Q9P2R3 1169 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 ADAM28Q9UKQ2 775 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 ODF2LQ9ULJ1 636 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
XRCC1-208ENST00000598422 NPHP3-ACAD11A0A0J9YXS1 232 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 F8W810 466 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 PTGESO14684 152 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 DCXO43602 365 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 ADH1AP07327 375 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 CNPP09543 421 aaKnown RBP16.04■□□□□ 0.16
XRCC1-208ENST00000598422 MCF2P10911 925 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 EPCAMP16422 314 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 GRM5P41594 1212 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 ITIH3Q06033 890 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 GLRA4Q5JXX5 417 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 TMEM31Q5JXX7 168 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 RARS2Q5T160 578 aaKnown RBP16.04■□□□□ 0.16
XRCC1-208ENST00000598422 MPZL3Q6UWV2 235 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 TMEM161BQ8NDZ6 487 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 RABGGTAQ92696 567 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 KHSRPQ92945 711 aaKnown RBP eCLIP16.04■□□□□ 0.16
XRCC1-208ENST00000598422 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 NECTIN4Q96NY8 510 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 KLHL5Q96PQ7 755 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 REEP2Q9BRK0 252 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 CCSER1Q9C0I3 900 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 S1PR5Q9H228 398 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 ZHX3Q9H4I2 956 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 CCDC39Q9UFE4 941 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 ATG2AQ2TAZ0 1938 aa16.04■□□□□ 0.16
XRCC1-208ENST00000598422 NCOR1O75376 2440 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 PI4K2BG5E9Z4 385 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 TOM1L1O75674 476 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 MAPTP10636 758 aaKnown RBP16.03■□□□□ 0.16
XRCC1-208ENST00000598422 MATR3P43243 847 aaKnown RBP eCLIP16.03■□□□□ 0.16
XRCC1-208ENST00000598422 OSTNP61366 133 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 DSG1Q02413 1049 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 MCM6Q14566 821 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 PTPAQ15257 358 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 USP41Q3LFD5 358 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 TAS1R3Q7RTX0 852 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 MYCT1Q8N699 235 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 HASPINQ8TF76 798 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 LARP4BQ92615 738 aaKnown RBP16.03■□□□□ 0.16
XRCC1-208ENST00000598422 FBXL18Q96ME1 805 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 RIPOR3Q96MK2 946 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 NTPCRQ9BSD7 190 aaKnown RBP16.03■□□□□ 0.16
XRCC1-208ENST00000598422 ADAM7Q9H2U9 754 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 SFXN1Q9H9B4 322 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 PARVGQ9HBI0 331 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.03■□□□□ 0.16
XRCC1-208ENST00000598422 BLOC1S4Q9NUP1 217 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 CACNG4Q9UBN1 327 aa16.03■□□□□ 0.16
XRCC1-208ENST00000598422 FBXO2Q9UK22 296 aaPredicted RBP16.03■□□□□ 0.16
XRCC1-208ENST00000598422 K7ENM7 598 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 KIF4AO95239 1232 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 GLUD1P00367 558 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 SCP2P22307 547 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 MTHFRP42898 656 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 CLCN4P51793 760 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 CREMQ03060 361 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 ELAVL2Q12926 359 aaKnown RBP16.02■□□□□ 0.16
XRCC1-208ENST00000598422 NOLC1Q14978 699 aaKnown RBP eCLIP16.02■□□□□ 0.16
XRCC1-208ENST00000598422 STK38Q15208 465 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 ARSHQ5FYA8 562 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 ZPBP2Q6X784 338 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 TAS1R1Q7RTX1 841 aa16.02■□□□□ 0.16
XRCC1-208ENST00000598422 RNF168Q8IYW5 571 aaPredicted RBP16.02■□□□□ 0.16
XRCC1-208ENST00000598422 C12orf76Q8N812 135 aaPredicted RBP16.02■□□□□ 0.16
XRCC1-208ENST00000598422 CEP120Q8N960 986 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms