RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 XXYLT1Q8NBI6 393 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 SLC9A7Q96T83 725 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 TSG101Q99816 390 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 DUSP9Q99956 384 aaKnown RBP13.15□□□□□ -0.3
APOC1-206ENST00000590334 UBE2OQ9C0C9 1292 aaKnown RBP13.15□□□□□ -0.3
APOC1-206ENST00000590334 PCIF1Q9H4Z3 704 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 CTNND2Q9UQB3 1225 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 GIT1Q9Y2X7 761 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 HES2Q9Y543 173 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 PCDHB7Q9Y5E2 793 aa13.15□□□□□ -0.3
APOC1-206ENST00000590334 RANBP2P49792 3224 aaKnown RBP13.15□□□□□ -0.3
APOC1-206ENST00000590334 CHD9Q3L8U1 2897 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 MEIS3P2A8K0S8 358 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 MAPK13O15264 365 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 CLTAP09496 248 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 ITGA4P13612 1032 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 NR2F2P24468 414 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 RPL13P26373 211 aaKnown RBP13.14□□□□□ -0.31
APOC1-206ENST00000590334 TNFSF9P41273 254 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 MCCD1P59942 119 aaPredicted RBP13.14□□□□□ -0.31
APOC1-206ENST00000590334 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
APOC1-206ENST00000590334 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 ZBTB41Q5SVQ8 909 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 ALKAL1Q6UXT8 129 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 C11orf57Q6ZUT1 292 aaPredicted RBP13.14□□□□□ -0.31
APOC1-206ENST00000590334 TMEM192Q8IY95 271 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 ZSWIM2Q8NEG5 633 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 ACAP3Q96P50 834 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 BPIFA3Q9BQP9 254 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 CCDC94Q9BW85 323 aaPredicted RBP13.14□□□□□ -0.31
APOC1-206ENST00000590334 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 RNF19AQ9NV58 838 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 PDE4DIPQ5VU43 2346 aa13.14□□□□□ -0.31
APOC1-206ENST00000590334 CEP290O15078 2479 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 TTC26A0AVF1 554 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 MEFVO15553 781 aaPredicted RBP13.13□□□□□ -0.31
APOC1-206ENST00000590334 HOXA2O43364 376 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 OFD1O75665 1012 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 DGKIO75912 1065 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 RECQL4O94761 1208 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 HARSP12081 509 aaKnown RBP13.13□□□□□ -0.31
APOC1-206ENST00000590334 AKAP5P24588 427 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 ACOT2P49753 483 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 CYP2J2P51589 502 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 ZNF445P59923 1031 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 ADAM9Q13443 819 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 ENOX2Q16206 610 aaKnown RBP13.13□□□□□ -0.31
APOC1-206ENST00000590334 ANO6Q4KMQ2 910 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 SEZ6Q53EL9 994 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 LRRC55Q6ZSA7 311 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 LPPQ93052 612 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
APOC1-206ENST00000590334 SAAL1Q96ER3 474 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 CEP63Q96MT8 703 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 MKNK1Q9BUB5 465 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 PLEKHA5Q9HAU0 1116 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 RC3H2Q9HBD1 1191 aaKnown RBP13.13□□□□□ -0.31
APOC1-206ENST00000590334 TOPORSQ9NS56 1045 aaPredicted RBP13.13□□□□□ -0.31
APOC1-206ENST00000590334 LRFN2Q9ULH4 789 aa13.13□□□□□ -0.31
APOC1-206ENST00000590334 ARL5CA6NH57 179 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 ZNF233A6NK53 670 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 CETN3O15182 167 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 EXOC3O60645 756 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 IL18RAPO95256 599 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 GJB5O95377 273 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 CAVIN2O95810 425 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 ATP2A2P16615 1042 aaKnown RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 YARSP54577 528 aaKnown RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 STX17P56962 302 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 OSTNP61366 133 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 HTRA4P83105 476 aaPredicted RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 ENPEPQ07075 957 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 SNRNP35Q16560 246 aaKnown RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 SLC10A6Q3KNW5 377 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 CLLU1OSQ5K130 101 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 LRSAM1Q6UWE0 723 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 CBWD2Q8IUF1 395 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 HERC6Q8IVU3 1022 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 BRSK2Q8IWQ3 736 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 CD302Q8IX05 232 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 GSTCDQ8NEC7 633 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 SNX27Q96L92 541 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 TSPAN18Q96SJ8 248 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 RPF1Q9H9Y2 349 aaKnown RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 RBAKQ9NYW8 714 aaPredicted RBP13.12□□□□□ -0.31
APOC1-206ENST00000590334 CNTN3Q9P232 1028 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 FRMD4BQ9Y2L6 1034 aa13.12□□□□□ -0.31
APOC1-206ENST00000590334 GOLGA8IPA6NC78 632 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms