RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 FZD9O00144 591 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 LEFTY2O00292 366 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 FAM20BO75063 409 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 MT-CO1P00395 513 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 ALOX15P16050 662 aaPredicted RBP4.89□□□□□ -1.63
VAPA-206ENST00000583475 SLC6A9P48067 706 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 FLT3LGP49771 235 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 MGAT2Q10469 447 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 PCBP2Q15366 365 aaKnown RBP eCLIP4.89□□□□□ -1.63
VAPA-206ENST00000583475 CLUL1Q15846 466 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 GJC2Q5T442 439 aaPredicted RBP4.89□□□□□ -1.63
VAPA-206ENST00000583475 FBXO18Q8NFZ0 1043 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.89□□□□□ -1.63
VAPA-206ENST00000583475 STON2Q8WXE9 905 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 SSH1Q8WYL5 1049 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 DPF2Q92785 391 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 FUBP3Q96I24 572 aaKnown RBP eCLIP4.89□□□□□ -1.63
VAPA-206ENST00000583475 GPATCH3Q96I76 525 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 SLC2A4RGQ9NR83 387 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 GPRC5BQ9NZH0 403 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 ZBTB21Q9ULJ3 1066 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 SORCS3Q9UPU3 1222 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 TNKSO95271 1327 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 PNPLA7Q6ZV29 1317 aa4.89□□□□□ -1.63
VAPA-206ENST00000583475 KLHL33A6NCF5 533 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 CXorf49A8MYA2 514 aaPredicted RBP4.88□□□□□ -1.63
VAPA-206ENST00000583475 AHRRA9YTQ3 701 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 MYBL2P10244 700 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 NR4A1P22736 598 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 APOBEC3AP31941 199 aaPredicted RBP4.88□□□□□ -1.63
VAPA-206ENST00000583475 GUCY1A2P33402 732 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 WASP42768 502 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 GDF5P43026 501 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 PER3P56645 1201 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 SP140Q13342 867 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 PTPROQ16827 1216 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 ABCB5Q2M3G0 1257 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 METRNLQ641Q3 311 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 EFCAB12Q6NXP0 572 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 FAM177A1Q8N128 213 aaPredicted RBP4.88□□□□□ -1.63
VAPA-206ENST00000583475 NRG4Q8WWG1 115 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 MTMR8Q96EF0 704 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 BRINP2Q9C0B6 783 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 LDAHQ9H6V9 325 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 TUBD1Q9UJT1 453 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 DNM3Q9UQ16 869 aa4.88□□□□□ -1.63
VAPA-206ENST00000583475 SHTN1A0MZ66 631 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 PJA2O43164 708 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 NDUFS2O75306 463 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 ENDOD1O94919 500 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 SCAF4O95104 1147 aaKnown RBP4.87□□□□□ -1.63
VAPA-206ENST00000583475 ZNF202O95125 648 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 IL2RBP14784 551 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 C5AR1P21730 350 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 ZFP36P26651 326 aaKnown RBP4.87□□□□□ -1.63
VAPA-206ENST00000583475 CLRN1P58418 232 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 KRT85P78386 507 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 ZNF276Q8N554 614 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.87□□□□□ -1.63
VAPA-206ENST00000583475 ZCRB1Q8TBF4 217 aaKnown RBP4.87□□□□□ -1.63
VAPA-206ENST00000583475 CPT1CQ8TCG5 803 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 TFAP2CQ92754 450 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 CYFIP2Q96F07 1278 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 UHRF1Q96T88 793 aaPredicted RBP4.87□□□□□ -1.63
VAPA-206ENST00000583475 ZNF768Q9H5H4 540 aaKnown RBP4.87□□□□□ -1.63
VAPA-206ENST00000583475 MMRN2Q9H8L6 949 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 INTUQ9ULD6 942 aa4.87□□□□□ -1.63
VAPA-206ENST00000583475 POLR2AP24928 1970 aaKnown RBP4.87□□□□□ -1.63
VAPA-206ENST00000583475 LOC105371045A0A1W2PR82 267 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 ANKRD62A6NC57 917 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 DRGXA6NNA5 263 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 CYR61O00622 381 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 TRIM24O15164 1050 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 RECQL4O94761 1208 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 SLPIP03973 132 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 AMY1AP04745 511 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 FPR1P21462 350 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 PCSK1P29120 753 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 NHLH2Q02577 135 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 KLF10Q13118 480 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 ODF1Q14990 250 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 ACAP2Q15057 778 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 AFMIDQ63HM1 303 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 ZFPM1Q8IX07 1006 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 RNF169Q8NCN4 708 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 OR10H5Q8NGA6 315 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 ZFP28Q8NHY6 868 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 ZNF483Q8TF39 744 aaPredicted RBP4.86□□□□□ -1.63
VAPA-206ENST00000583475 SLC25A43Q8WUT9 341 aaPredicted RBP4.86□□□□□ -1.63
VAPA-206ENST00000583475 SORCS2Q96PQ0 1159 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 DCLRE1CQ96SD1 692 aaKnown RBP4.86□□□□□ -1.63
VAPA-206ENST00000583475 MRI1Q9BV20 369 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 ASPSCR1Q9BZE9 553 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 PCED1AQ9H1Q7 454 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 POGKQ9P215 609 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 EIF2B4Q9UI10 523 aaKnown RBP4.86□□□□□ -1.63
VAPA-206ENST00000583475 AJAP1Q9UKB5 411 aaPredicted RBP4.86□□□□□ -1.63
VAPA-206ENST00000583475 CHST2Q9Y4C5 530 aa4.86□□□□□ -1.63
VAPA-206ENST00000583475 FAM171A2A8MVW0 826 aa4.85□□□□□ -1.63
VAPA-206ENST00000583475 ZNF185O15231 689 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms