RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 NUMBLQ9Y6R0 609 aa15.06■□□□□ 0
SS18-222ENST00000582792 DNAH14Q0VDD8 3507 aa15.05■□□□□ 0
SS18-222ENST00000582792 B4GALT5O43286 388 aa15.05■□□□□ -0
SS18-222ENST00000582792 DGAT1O75907 488 aa15.05■□□□□ -0
SS18-222ENST00000582792 LYPLA2O95372 231 aa15.05■□□□□ -0
SS18-222ENST00000582792 NPTXRO95502 500 aa15.05■□□□□ -0
SS18-222ENST00000582792 SP9P0CG40 484 aa15.05■□□□□ -0
SS18-222ENST00000582792 DCLRE1AQ6PJP8 1040 aa15.05■□□□□ -0
SS18-222ENST00000582792 ZC3H14Q6PJT7 736 aaKnown RBP15.05■□□□□ -0
SS18-222ENST00000582792 C1orf210Q8IVY1 113 aa15.05■□□□□ -0
SS18-222ENST00000582792 RABGGTAQ92696 567 aa15.05■□□□□ -0
SS18-222ENST00000582792 EIF2AK1Q9BQI3 630 aaKnown RBP15.05■□□□□ -0
SS18-222ENST00000582792 ANKEF1Q9NU02 776 aa15.05■□□□□ -0
SS18-222ENST00000582792 SF3B1O75533 1304 aaKnown RBP eCLIP15.05■□□□□ -04e-6■■■■■ 96
SS18-222ENST00000582792 STK36Q9NRP7 1315 aa15.05■□□□□ -0
SS18-222ENST00000582792 FANCMQ8IYD8 2048 aa15.05■□□□□ -0
SS18-222ENST00000582792 A0A1B0GUA9 196 aa15.04■□□□□ -0
SS18-222ENST00000582792 TADA2AO75478 443 aa15.04■□□□□ -0
SS18-222ENST00000582792 GLRA2P23416 452 aa15.04■□□□□ -0
SS18-222ENST00000582792 FSHRP23945 695 aa15.04■□□□□ -0
SS18-222ENST00000582792 STARD6P59095 220 aa15.04■□□□□ -0
SS18-222ENST00000582792 SCRN1Q12765 414 aa15.04■□□□□ -0
SS18-222ENST00000582792 HSP90AA2PQ14568 343 aaPredicted RBP15.04■□□□□ -0
SS18-222ENST00000582792 EARS2Q5JPH6 523 aaKnown RBP15.04■□□□□ -0
SS18-222ENST00000582792 RTP2Q5QGT7 225 aa15.04■□□□□ -0
SS18-222ENST00000582792 PRSS55Q6UWB4 352 aaPredicted RBP15.04■□□□□ -0
SS18-222ENST00000582792 GRASPQ7Z6J2 395 aaPredicted RBP15.04■□□□□ -0
SS18-222ENST00000582792 CDR2LQ86X02 465 aaPredicted RBP15.04■□□□□ -0
SS18-222ENST00000582792 PJA1Q8NG27 643 aa15.04■□□□□ -0
SS18-222ENST00000582792 RMDN1Q96DB5 314 aa15.04■□□□□ -0
SS18-222ENST00000582792 HSD17B14Q9BPX1 270 aa15.04■□□□□ -0
SS18-222ENST00000582792 KLK14Q9P0G3 267 aa15.04■□□□□ -0
SS18-222ENST00000582792 PARP2Q9UGN5 583 aa15.04■□□□□ -0
SS18-222ENST00000582792 FBXW11Q9UKB1 542 aa15.04■□□□□ -0
SS18-222ENST00000582792 OTOGLQ3ZCN5 2332 aa15.04■□□□□ -0
SS18-222ENST00000582792 FAM205CA6NFA0 338 aa15.03■□□□□ -0
SS18-222ENST00000582792 HNRNPA1P09651 372 aaKnown RBP eCLIP15.03■□□□□ -0
SS18-222ENST00000582792 GLULP15104 373 aa15.03■□□□□ -0
SS18-222ENST00000582792 RARRES1P49788 294 aa15.03■□□□□ -0
SS18-222ENST00000582792 TUSC3Q13454 348 aa15.03■□□□□ -0
SS18-222ENST00000582792 KIAA2013Q8IYS2 634 aa15.03■□□□□ -0
SS18-222ENST00000582792 ST13P5Q8NFI4 369 aaPredicted RBP15.03■□□□□ -0
SS18-222ENST00000582792 PIK3R5Q8WYR1 880 aa15.03■□□□□ -0
SS18-222ENST00000582792 FGF14Q92915 247 aa15.03■□□□□ -0
SS18-222ENST00000582792 SHDQ96IW2 340 aa15.03■□□□□ -0
SS18-222ENST00000582792 PAAF1Q9BRP4 392 aa15.03■□□□□ -0
SS18-222ENST00000582792 RPP25Q9BUL9 199 aaKnown RBP15.03■□□□□ -0
SS18-222ENST00000582792 FOXQ1Q9C009 403 aa15.03■□□□□ -0
SS18-222ENST00000582792 PDRG1Q9NUG6 133 aa15.03■□□□□ -0
SS18-222ENST00000582792 CACNG4Q9UBN1 327 aa15.03■□□□□ -0
SS18-222ENST00000582792 CDH7Q9ULB5 785 aa15.03■□□□□ -0
SS18-222ENST00000582792 PCDHA12Q9UN75 941 aa15.03■□□□□ -0
SS18-222ENST00000582792 MYH15Q9Y2K3 1946 aa15.03■□□□□ -0
SS18-222ENST00000582792 DOCK6Q96HP0 2047 aa15.02■□□□□ -0
SS18-222ENST00000582792 POTEMA6NI47 508 aa15.02■□□□□ -0
SS18-222ENST00000582792 HOXA9P31269 272 aa15.02■□□□□ -0
SS18-222ENST00000582792 GPC5P78333 572 aa15.02■□□□□ -0
SS18-222ENST00000582792 NR5A1Q13285 461 aa15.02■□□□□ -0
SS18-222ENST00000582792 LIN9Q5TKA1 542 aa15.02■□□□□ -0
SS18-222ENST00000582792 PARM1Q6UWI2 310 aa15.02■□□□□ -0
SS18-222ENST00000582792 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
SS18-222ENST00000582792 LNX1Q8TBB1 728 aaPredicted RBP15.02■□□□□ -0
SS18-222ENST00000582792 CCDC43Q96MW1 224 aaKnown RBP15.02■□□□□ -0
SS18-222ENST00000582792 CLSTN3Q9BQT9 956 aa15.02■□□□□ -0
SS18-222ENST00000582792 TTPALQ9BTX7 342 aa15.02■□□□□ -0
SS18-222ENST00000582792 POLR3FQ9H1D9 316 aaPredicted RBP15.02■□□□□ -0
SS18-222ENST00000582792 CEP250Q9BV73 2442 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 CASTOR2A6NHX0 329 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 LRRN2O75325 713 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 KIF4AO95239 1232 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 C8AP07357 584 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 NTHL1P78549 312 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 PSMD5Q16401 504 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 CALCRLQ16602 461 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 PPM1LQ5SGD2 360 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 MTSS1LQ765P7 747 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 MAML2Q8IZL2 1156 aaPredicted RBP15.01□□□□□ -0.01
SS18-222ENST00000582792 PIGOQ8TEQ8 1089 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 HASPINQ8TF76 798 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 RUBCNQ92622 972 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 TNFRSF25Q93038 417 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 PRIMPOLQ96LW4 560 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 HINFPQ9BQA5 517 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
SS18-222ENST00000582792 TTC12Q9H892 705 aaPredicted RBP15.01□□□□□ -0.01
SS18-222ENST00000582792 PRMT7Q9NVM4 692 aaPredicted RBP15.01□□□□□ -0.01
SS18-222ENST00000582792 MIA3Q5JRA6 1907 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 CACNA1IQ9P0X4 2223 aa15.01□□□□□ -0.01
SS18-222ENST00000582792 KANSL1LA0AUZ9 987 aa15□□□□□ -0.01
SS18-222ENST00000582792 LRRIQ4A6NIV6 560 aa15□□□□□ -0.01
SS18-222ENST00000582792 PTGESO14684 152 aa15□□□□□ -0.01
SS18-222ENST00000582792 USO1O60763 962 aaKnown RBP15□□□□□ -0.01
SS18-222ENST00000582792 PFKFB2O60825 505 aa15□□□□□ -0.01
SS18-222ENST00000582792 DTNBO60941 627 aa15□□□□□ -0.01
SS18-222ENST00000582792 CTDNEP1O95476 244 aa15□□□□□ -0.01
SS18-222ENST00000582792 KRT2P35908 639 aa15□□□□□ -0.01
SS18-222ENST00000582792 PRKCQQ04759 706 aa15□□□□□ -0.01
SS18-222ENST00000582792 SNW1Q13573 536 aaKnown RBP15□□□□□ -0.01
SS18-222ENST00000582792 ANKRD1Q15327 319 aa15□□□□□ -0.01
SS18-222ENST00000582792 FAM187BQ17R55 369 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms