RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	SEMA4A	Q9H3S1	761 aa		4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	MS4A5	Q9H3V2	200 aa		4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	IFT122	Q9HBG6	1241 aa		4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	SAE1	Q9UBE0	346 aa	Predicted RBP	4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	TMPRSS11E	Q9UL52	423 aa		4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	KNSTRN	Q9Y448	316 aa		4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	PMF1-BGLAP	U3KQ54	211 aa		4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	NSD3	Q9BZ95	1437 aa		4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	THSD7A	Q9UPZ6	1657 aa		4.95	□□□□□ -1.62
MSI2-211	ENST00000579531	LRP6	O75581	1613 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	SCN11A	Q9UI33	1791 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531		A0A0G2JNJ9	132 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	CAND2	O75155	1236 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	FSBP	O95073	299 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	PCDH8	O95206	1070 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	GC	P02774	474 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	PF4V1	P10720	104 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	HSPA6	P17066	643 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	PTMS	P20962	102 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	RPL13	P26373	211 aa	Known RBP	4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	THBS2	P35442	1172 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	MC3R	P41968	323 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	WAS	P42768	502 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	HTRA3	P83110	453 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	PPARA	Q07869	468 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	LRSAM1	Q6UWE0	723 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	LMBR1L	Q6UX01	489 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	OTOP2	Q7RTS6	562 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	WDR75	Q8IWA0	830 aa	Known RBP	4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	STPG3	Q8N7X2	389 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	TGFBRAP1	Q8WUH2	860 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	JADE3	Q92613	823 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	GFM2	Q969S9	779 aa	Known RBP	4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	COG3	Q96JB2	828 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	TACO1	Q9BSH4	297 aa	Known RBP	4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	ACE2	Q9BYF1	805 aa	Predicted RBP	4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	GCM1	Q9NP62	436 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	NMRK2	Q9NPI5	230 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	PRDM11	Q9NQV5	511 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.94	□□□□□ -1.62
MSI2-211	ENST00000579531		Q9UFV3	132 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	DPP7	Q9UHL4	492 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	NCAPD2	Q15021	1401 aa		4.94	□□□□□ -1.62
MSI2-211	ENST00000579531	FLT4	P35916	1363 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	ZNF831	Q5JPB2	1677 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	ITGB4	P16144	1822 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	LCHN	A4D1U4	455 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PCDHGA12	O60330	932 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	NDUFS2	O75306	463 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	SEC24D	O94855	1032 aa	Predicted RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	FARP2	O94887	1054 aa	Predicted RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	IL18BP	O95998	194 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	KNG1	P01042	644 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	RPLP2	P05387	115 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	CLEC2L	P0C7M8	214 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	POLD1	P28340	1107 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	ETV4	P43268	484 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	GLRB	P48167	497 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	EPHB3	P54753	998 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	NCKAP1L	P55160	1127 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	SET	Q01105	290 aa	Predicted RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	MALL	Q13021	153 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	MLC1	Q15049	377 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	EIF4H	Q15056	248 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	RALBP1	Q15311	655 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	MUM1L1	Q5H9M0	696 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	ZNF772	Q68DY9	489 aa	Predicted RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	BTNL9	Q6UXG8	535 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	SLC41A1	Q8IVJ1	513 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	TMEM151B	Q8IW70	566 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	CMIP	Q8IY22	773 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	RAVER1	Q8IY67	606 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PPP1R14C	Q8TAE6	165 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	ZBTB8A	Q96BR9	441 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	DYDC2	Q96IM9	177 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	SLC38A3	Q99624	504 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	GREM2	Q9H772	168 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PANK3	Q9H999	370 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	L2HGDH	Q9H9P8	463 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	NTM	Q9P121	344 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	RBPJL	Q9UBG7	517 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	RCAN3	Q9UKA8	241 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	CROT	Q9UKG9	612 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PLA2G2D	Q9UNK4	145 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PCDHGA8	Q9Y5G5	932 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PCDHGA7	Q9Y5G6	932 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PCDHGA6	Q9Y5G7	932 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PCDHGA3	Q9Y5H0	932 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	PCDHGA2	Q9Y5H1	932 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	COL5A2	P05997	1499 aa	Predicted RBP	4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	BCL9L	Q86UU0	1499 aa		4.93	□□□□□ -1.62
MSI2-211	ENST00000579531	ADAMTS7	Q9UKP4	1686 aa		4.92	□□□□□ -1.62
MSI2-211	ENST00000579531	PARD3	Q8TEW0	1356 aa		4.92	□□□□□ -1.62
MSI2-211	ENST00000579531	SIPA1L3	O60292	1781 aa	Predicted RBP	4.92	□□□□□ -1.62
MSI2-211	ENST00000579531	TCAF2	A6NFQ2	919 aa		4.92	□□□□□ -1.62
MSI2-211	ENST00000579531	C9orf118	A6NHY6	69 aa		4.92	□□□□□ -1.62
MSI2-211	ENST00000579531	FAM171A2	A8MVW0	826 aa		4.92	□□□□□ -1.62
MSI2-211	ENST00000579531	DAPK3	O43293	454 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms