RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-211ENST00000579531 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
MSI2-211ENST00000579531 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
MSI2-211ENST00000579531 PHF23Q9BUL5 403 aaPredicted RBP14.61□□□□□ -0.07
MSI2-211ENST00000579531 SENP3Q9H4L4 574 aaPredicted RBP14.26□□□□□ -0.13
MSI2-211ENST00000579531 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
MSI2-211ENST00000579531 FOXD1Q16676 465 aa13.06□□□□□ -0.32
MSI2-211ENST00000579531 ADRA2BP18089 450 aa12.78□□□□□ -0.36
MSI2-211ENST00000579531 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
MSI2-211ENST00000579531 PIAS4Q8N2W9 510 aaPredicted RBP12.44□□□□□ -0.42
MSI2-211ENST00000579531 KCNA4P22459 653 aa12.12□□□□□ -0.47
MSI2-211ENST00000579531 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
MSI2-211ENST00000579531 MSH5O43196 834 aa12.08□□□□□ -0.48
MSI2-211ENST00000579531 NCBP3Q53F19 620 aaKnown RBP12.01□□□□□ -0.49
MSI2-211ENST00000579531 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
MSI2-211ENST00000579531 CNKSR2Q8WXI2 1034 aa11.76□□□□□ -0.53
MSI2-211ENST00000579531 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
MSI2-211ENST00000579531 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
MSI2-211ENST00000579531 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
MSI2-211ENST00000579531 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
MSI2-211ENST00000579531 MAPK8IP2Q13387 824 aaPredicted RBP11.46□□□□□ -0.57
MSI2-211ENST00000579531 RNF216Q9NWF9 866 aaPredicted RBP11.46□□□□□ -0.57
MSI2-211ENST00000579531 DMRT2Q9Y5R5 561 aa11.4□□□□□ -0.58
MSI2-211ENST00000579531 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
MSI2-211ENST00000579531 HOXD11P31277 338 aaPredicted RBP11.3□□□□□ -0.6
MSI2-211ENST00000579531 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
MSI2-211ENST00000579531 ZBTB22O15209 634 aa11.11□□□□□ -0.63
MSI2-211ENST00000579531 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
MSI2-211ENST00000579531 MYCNP04198 464 aaPredicted RBP10.88□□□□□ -0.67
MSI2-211ENST00000579531 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
MSI2-211ENST00000579531 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
MSI2-211ENST00000579531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
MSI2-211ENST00000579531 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
MSI2-211ENST00000579531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSI2-211ENST00000579531 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
MSI2-211ENST00000579531 APLP2Q06481 763 aa10.6□□□□□ -0.71
MSI2-211ENST00000579531 U3KPZ7 1027 aaPredicted RBP10.56□□□□□ -0.72
MSI2-211ENST00000579531 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
MSI2-211ENST00000579531 ZNF219Q9P2Y4 722 aaPredicted RBP10.31□□□□□ -0.76
MSI2-211ENST00000579531 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
MSI2-211ENST00000579531 FKBP8Q14318 412 aa10.28□□□□□ -0.76
MSI2-211ENST00000579531 POTEDQ86YR6 584 aa10.28□□□□□ -0.76
MSI2-211ENST00000579531 C1QBPQ07021 282 aaKnown RBP10.27□□□□□ -0.77
MSI2-211ENST00000579531 CAPN15O75808 1086 aa10.14□□□□□ -0.79
MSI2-211ENST00000579531 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
MSI2-211ENST00000579531 FBLN2P98095 1184 aa10.13□□□□□ -0.79
MSI2-211ENST00000579531 SPINK5Q9NQ38 1064 aaPredicted RBP10.11□□□□□ -0.79
MSI2-211ENST00000579531 ZBTB12Q9Y330 459 aaPredicted RBP10.11□□□□□ -0.79
MSI2-211ENST00000579531 POLA2Q14181 598 aa10.06□□□□□ -0.8
MSI2-211ENST00000579531 AMER1Q5JTC6 1135 aaPredicted RBP10.06□□□□□ -0.8
MSI2-211ENST00000579531 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
MSI2-211ENST00000579531 MKRN4PQ13434 485 aaPredicted RBP9.99□□□□□ -0.81
MSI2-211ENST00000579531 FBXO3Q9UK99 471 aa9.99□□□□□ -0.81
MSI2-211ENST00000579531 PROM2Q8N271 834 aa9.91□□□□□ -0.82
MSI2-211ENST00000579531 ABCB7O75027 752 aa9.89□□□□□ -0.83
MSI2-211ENST00000579531 DSG3P32926 999 aa9.89□□□□□ -0.83
MSI2-211ENST00000579531 RTN4Q9NQC3 1192 aaKnown RBP9.87□□□□□ -0.83
MSI2-211ENST00000579531 SPDYE2BA6NHP3 402 aa9.79□□□□□ -0.84
MSI2-211ENST00000579531 SPDYE6P0CI01 402 aa9.79□□□□□ -0.84
MSI2-211ENST00000579531 CACNB1Q02641 598 aaPredicted RBP9.79□□□□□ -0.84
MSI2-211ENST00000579531 SPDYE2Q495Y8 402 aa9.79□□□□□ -0.84
MSI2-211ENST00000579531 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
MSI2-211ENST00000579531 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
MSI2-211ENST00000579531 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
MSI2-211ENST00000579531 OSCARQ8IYS5 282 aa9.69□□□□□ -0.86
MSI2-211ENST00000579531 STAG3Q9UJ98 1225 aa9.68□□□□□ -0.86
MSI2-211ENST00000579531 PABPN1Q86U42 306 aaKnown RBP eCLIP9.59□□□□□ -0.87
MSI2-211ENST00000579531 IFNLR1Q8IU57 520 aaPredicted RBP9.56□□□□□ -0.88
MSI2-211ENST00000579531 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
MSI2-211ENST00000579531 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
MSI2-211ENST00000579531 PLEKHG5O94827 1062 aa9.53□□□□□ -0.88
MSI2-211ENST00000579531 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
MSI2-211ENST00000579531 PLCD3Q8N3E9 789 aa9.5□□□□□ -0.89
MSI2-211ENST00000579531 KLHL34Q8N239 644 aa9.49□□□□□ -0.89
MSI2-211ENST00000579531 SPOCK2Q92563 424 aa9.49□□□□□ -0.89
MSI2-211ENST00000579531 AKT1S1Q96B36 256 aa9.46□□□□□ -0.9
MSI2-211ENST00000579531 MIER1Q8N108 512 aa9.45□□□□□ -0.9
MSI2-211ENST00000579531 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
MSI2-211ENST00000579531 PKD2Q13563 968 aa9.37□□□□□ -0.91
MSI2-211ENST00000579531 TRIM41Q8WV44 630 aa9.33□□□□□ -0.92
MSI2-211ENST00000579531 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
MSI2-211ENST00000579531 DCAF8L2P0C7V8 631 aa9.29□□□□□ -0.92
MSI2-211ENST00000579531 REM2Q8IYK8 340 aaPredicted RBP9.29□□□□□ -0.92
MSI2-211ENST00000579531 PRR29P0C7W0 189 aa9.28□□□□□ -0.92
MSI2-211ENST00000579531 GSE1Q14687 1217 aa9.25□□□□□ -0.93
MSI2-211ENST00000579531 CLEC11AQ9Y240 323 aa9.25□□□□□ -0.93
MSI2-211ENST00000579531 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
MSI2-211ENST00000579531 CIZ1Q9ULV3 898 aaPredicted RBP9.22□□□□□ -0.93
MSI2-211ENST00000579531 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
MSI2-211ENST00000579531 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.18□□□□□ -0.94
MSI2-211ENST00000579531 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
MSI2-211ENST00000579531 BBXQ8WY36 941 aaPredicted RBP9.17□□□□□ -0.94
MSI2-211ENST00000579531 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
MSI2-211ENST00000579531 FAM212AQ96EL1 285 aa9.16□□□□□ -0.94
MSI2-211ENST00000579531 PITPNM1O00562 1244 aa9.15□□□□□ -0.94
MSI2-211ENST00000579531 NUBP1P53384 320 aa9.15□□□□□ -0.94
MSI2-211ENST00000579531 RGL2O15211 777 aa9.13□□□□□ -0.95
MSI2-211ENST00000579531 MNX1P50219 401 aaPredicted RBP9.11□□□□□ -0.95
MSI2-211ENST00000579531 DCAF8Q5TAQ9 597 aa9.11□□□□□ -0.95
MSI2-211ENST00000579531 CHRM1P11229 460 aaPredicted RBP9.08□□□□□ -0.96
MSI2-211ENST00000579531 HAP1P54257 671 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms