RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 BSNDQ8WZ55 320 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 CCDC113Q9H0I3 377 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.47■□□□□ 0.23
MKS1-205ENST00000577315 CHST7Q9NS84 486 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 KLK14Q9P0G3 267 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 FNIP2Q9P278 1114 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 KCNG1Q9UIX4 513 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 KMT2EQ8IZD2 1858 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 DOCK8Q8NF50 2099 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 TEX28O15482 410 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 TADA2AO75478 443 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 THP07101 528 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 SP100P23497 879 aaPredicted RBP16.46■□□□□ 0.23
MKS1-205ENST00000577315 ELAVL2Q12926 359 aaKnown RBP16.46■□□□□ 0.23
MKS1-205ENST00000577315 HSP90AA2PQ14568 343 aaPredicted RBP16.46■□□□□ 0.23
MKS1-205ENST00000577315 NBR1Q14596 966 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 ECM1Q16610 540 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 CCDC149Q6ZUS6 474 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 OTOP3Q7RTS5 596 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 TAS1R1Q7RTX1 841 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 KREMEN2Q8NCW0 462 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 TIPINQ9BVW5 301 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 PLEKHA4Q9H4M7 779 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 C17orf75Q9HAS0 396 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 SNTG2Q9NY99 539 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 CDH22Q9UJ99 828 aa16.46■□□□□ 0.23
MKS1-205ENST00000577315 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
MKS1-205ENST00000577315 VWA8A3KMH1 1905 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 K7ERI5 159 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 WEE2P0C1S8 567 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 STAMQ92783 540 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 ASIC4Q96FT7 647 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 DRC1Q96MC2 740 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 TMEM134Q9H6X4 195 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 MAN1C1Q9NR34 630 aa16.45■□□□□ 0.22
MKS1-205ENST00000577315 H3BQV1 296 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 RECQL4O94761 1208 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 LIG1P18858 919 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 ATF7IP2Q5U623 682 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 PDXDC1Q6P996 788 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 GPR62Q9BZJ7 368 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 NT5C3AQ9H0P0 336 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 TNFSF13BQ9Y275 285 aa16.44■□□□□ 0.22
MKS1-205ENST00000577315 RBM19Q9Y4C8 960 aaKnown RBP16.44■□□□□ 0.22
MKS1-205ENST00000577315 PIEZO1Q92508 2521 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 TTLL13PA6NNM8 815 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 CCDC169A6NNP5 214 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 E9PMD0 336 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 PTGESO14684 152 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 PAPLNO95428 1278 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 NUBP1P53384 320 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 ATP2C1P98194 919 aaPredicted RBP16.43■□□□□ 0.22
MKS1-205ENST00000577315 DMP1Q13316 513 aaPredicted RBP16.43■□□□□ 0.22
MKS1-205ENST00000577315 RIN2Q8WYP3 895 aaPredicted RBP16.43■□□□□ 0.22
MKS1-205ENST00000577315 ZDHHC7Q9NXF8 308 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 LIMD1Q9UGP4 676 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.43■□□□□ 0.22
MKS1-205ENST00000577315 PDCD11Q14690 1871 aaKnown RBP16.43■□□□□ 0.22
MKS1-205ENST00000577315 DOCK6Q96HP0 2047 aa16.43■□□□□ 0.22
MKS1-205ENST00000577315 CCDC195A0A1B0GUA6 201 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 CASTOR2A6NHX0 329 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 F8W810 466 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 SLC26A4O43511 780 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 HIP1RO75146 1068 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 GJB2P29033 226 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 PEX3P56589 373 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 HYIQ5T013 277 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 NT5DC1Q5TFE4 455 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 EEF1DP3Q658K8 133 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
MKS1-205ENST00000577315 RINT1Q6NUQ1 792 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 UROC1Q96N76 676 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 TTPALQ9BTX7 342 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 KIFC3Q9BVG8 833 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
MKS1-205ENST00000577315 MRPL4Q9BYD3 311 aaKnown RBP16.42■□□□□ 0.22
MKS1-205ENST00000577315 IRF2BPLQ9H1B7 796 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 WDR6Q9NNW5 1121 aaKnown RBP16.42■□□□□ 0.22
MKS1-205ENST00000577315 KMT5AQ9NQR1 393 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 TOPORSQ9NS56 1045 aaPredicted RBP16.42■□□□□ 0.22
MKS1-205ENST00000577315 KCND2Q9NZV8 630 aa16.42■□□□□ 0.22
MKS1-205ENST00000577315 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 TGM5O43548 720 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 EDN1P05305 212 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 NPTX2P47972 431 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
MKS1-205ENST00000577315 PTPN5P54829 565 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 NHLH1Q02575 133 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 NAB2Q15742 525 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 C1orf186Q6ZWK4 172 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 PIK3R5Q8WYR1 880 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 CDK5RAP3Q96JB5 506 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 NTPCRQ9BSD7 190 aaKnown RBP16.41■□□□□ 0.22
MKS1-205ENST00000577315 MMTAG2Q9BU76 263 aaKnown RBP16.41■□□□□ 0.22
MKS1-205ENST00000577315 IGSF9Q9P2J2 1179 aa16.41■□□□□ 0.22
MKS1-205ENST00000577315 ARHGAP28Q9P2N2 729 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms