RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ANKRD1Q15327 319 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 USP41Q3LFD5 358 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 RTP2Q5QGT7 225 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 CCDC105Q8IYK2 499 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 STAMQ92783 540 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 NFKBIZQ9BYH8 718 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 EPS15L1Q9UBC2 864 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 DPP7Q9UHL4 492 aa17.2■□□□□ 0.34
NME3-211ENST00000568561 STK25O00506 426 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 MED24O75448 989 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 SPATA31C1P0DKV0 1188 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 LIG1P18858 919 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 RFX1P22670 979 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
NME3-211ENST00000568561 ANGPT1Q15389 498 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 DTWD2Q8NBA8 298 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 BSNDQ8WZ55 320 aa17.19■□□□□ 0.34
NME3-211ENST00000568561 NKD2Q969F2 451 aaPredicted RBP17.19■□□□□ 0.34
NME3-211ENST00000568561 TADA2AO75478 443 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 KIF4AO95239 1232 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 EDN1P05305 212 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 MCM7P33993 719 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 ANAPC15P60006 121 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 ST3GAL1Q11201 340 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 LILRA6Q6PI73 481 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 CATSPER3Q86XQ3 398 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 SLC44A3Q8N4M1 653 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 RHOBTB2Q9BYZ6 727 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 PRKD2Q9BZL6 878 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 PLEKHA4Q9H4M7 779 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 PDZD7Q9H5P4 517 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.18■□□□□ 0.34
NME3-211ENST00000568561 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
NME3-211ENST00000568561 SNTG2Q9NY99 539 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 FNIP2Q9P278 1114 aa17.18■□□□□ 0.34
NME3-211ENST00000568561 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.34
NME3-211ENST00000568561 PTGESO14684 152 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 NTHL1P78549 312 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 TUSC3Q13454 348 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 TRIM29Q14134 588 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 TMEM132AQ24JP5 1023 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 FAM171A1Q5VUB5 890 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 CDCA2Q69YH5 1023 aaPredicted RBP17.17■□□□□ 0.34
NME3-211ENST00000568561 CYP26C1Q6V0L0 522 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 CEP57Q86XR8 500 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 ZBTB8OSQ8IWT0 167 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 GPR152Q8TDT2 470 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 HDAC7Q8WUI4 952 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 RTP3Q9BQQ7 232 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 TBC1D17Q9HA65 648 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 POLD4Q9HCU8 107 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 ZDHHC7Q9NXF8 308 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 WNT16Q9UBV4 365 aa17.17■□□□□ 0.34
NME3-211ENST00000568561 ZMYM2Q9UBW7 1377 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 MIA3Q5JRA6 1907 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 ADAM12O43184 909 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 ZMYND10O75800 440 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 RECQL4O94761 1208 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 SRFP11831 508 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 LAMP2P13473 410 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 HTR4Q13639 388 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 PSMD5Q16401 504 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 EEF1DP3Q658K8 133 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 NOSTRINQ8IVI9 506 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 MCPH1Q8NEM0 835 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 PRIMPOLQ96LW4 560 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 CLSTN3Q9BQT9 956 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 KIFC3Q9BVG8 833 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 FZD8Q9H461 694 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 FBXW11Q9UKB1 542 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 NUMBLQ9Y6R0 609 aa17.16■□□□□ 0.34
NME3-211ENST00000568561 NOTCH4Q99466 2003 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 PAPLNO95428 1278 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 PRKCBP05771 671 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 IGFBP6P24592 240 aaPredicted RBP17.15■□□□□ 0.34
NME3-211ENST00000568561 CREMQ03060 361 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 PRPF4BQ13523 1007 aaKnown RBP17.15■□□□□ 0.34
NME3-211ENST00000568561 GRASPQ7Z6J2 395 aaPredicted RBP17.15■□□□□ 0.34
NME3-211ENST00000568561 ADSSL1Q8N142 457 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 TTPALQ9BTX7 342 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 RPP25Q9BUL9 199 aaKnown RBP17.15■□□□□ 0.34
NME3-211ENST00000568561 TUFT1Q9NNX1 390 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 ARHGEF3Q9NR81 526 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 GDAQ9Y2T3 454 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 CACNA1IQ9P0X4 2223 aa17.15■□□□□ 0.34
NME3-211ENST00000568561 N4BP3O15049 544 aa17.14■□□□□ 0.33
NME3-211ENST00000568561 DCNP07585 359 aaKnown RBP17.14■□□□□ 0.33
NME3-211ENST00000568561 XRCC6P12956 609 aaKnown RBP eCLIP17.14■□□□□ 0.336e-11■■■■□ 23.7
NME3-211ENST00000568561 FSHRP23945 695 aa17.14■□□□□ 0.33
NME3-211ENST00000568561 NEK4P51957 841 aa17.14■□□□□ 0.33
NME3-211ENST00000568561 NAB2Q15742 525 aa17.14■□□□□ 0.33
NME3-211ENST00000568561 GLRA4Q5JXX5 417 aa17.14■□□□□ 0.33
NME3-211ENST00000568561 PADI6Q6TGC4 694 aa17.14■□□□□ 0.33
NME3-211ENST00000568561 LNX1Q8TBB1 728 aaPredicted RBP17.14■□□□□ 0.33
NME3-211ENST00000568561 PIK3R5Q8WYR1 880 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms