RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 RTN2O75298 545 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 MYL2P10916 166 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 PTPN12Q05209 780 aaKnown RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 SCRN1Q12765 414 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 MTFR1Q15390 333 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 MTHFSDQ2M296 383 aaKnown RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 CCDC137Q6PK04 289 aaKnown RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 NIM1KQ8IY84 436 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 CYFIP2Q96F07 1278 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 HINFPQ9BQA5 517 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 NGRNQ9NPE2 291 aaKnown RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 TFCP2L1Q9NZI6 479 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 AURKCQ9UQB9 309 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 TNRQ92752 1358 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 TEX28O15482 410 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 NNMTP40261 264 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 TNFAIP2Q03169 654 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 ZNF667Q5HYK9 610 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 TAF2Q6P1X5 1199 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 IYDQ6PHW0 289 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 C11orf57Q6ZUT1 292 aaPredicted RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 NEK10Q6ZWH5 1172 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 RHPN2Q8IUC4 686 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 RFFLQ8WZ73 363 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.36□□□□□ -1.55
SMG1-211ENST00000565324 SLC9A2Q9UBY0 812 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 FBXL5Q9UKA1 691 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 ENO1P06733 434 aaKnown RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 PLCG1P19174 1290 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 KRT20P35900 424 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 SLC1A1P43005 524 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 TIMM10P62072 90 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 RCN1Q15293 331 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 PPP4R4Q6NUP7 873 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 LRRC8DQ7L1W4 858 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 SFR1Q86XK3 245 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 PPM1NQ8N819 430 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 TMA16Q96EY4 203 aaKnown RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 MLPHQ9BV36 600 aaPredicted RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 TRABDQ9H4I3 376 aa5.36□□□□□ -1.55
SMG1-211ENST00000565324 RPRD1BQ9NQG5 326 aaKnown RBP5.36□□□□□ -1.55
SMG1-211ENST00000565324 CCT8L1PA6NM43 557 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 XPO1O14980 1071 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 HADHAP40939 763 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 CTCFP49711 727 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 STX5Q13190 355 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ZYXQ15942 572 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 SPANXN2Q5MJ10 180 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ZNF544Q6NX49 715 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 DPP8Q6V1X1 898 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 OR8H2Q8N162 312 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 APBB2Q92870 758 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ROPN1BQ9BZX4 212 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 USP44Q9H0E7 712 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ROPN1Q9HAT0 212 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 CROCC2H7BZ55 1655 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 PRPF3O43395 683 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 FNTAP49354 379 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ZNF200P98182 395 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 CTTNQ14247 550 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 KRT77Q7Z794 578 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 IFNL3Q8IZI9 196 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 GALNT4Q8N4A0 578 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 PDCD6IPQ8WUM4 868 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 CARD14Q9BXL6 1004 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 RIC8BQ9NVN3 520 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 STK36Q9NRP7 1315 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 A0A1W2PP64 1363 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ITIH2P19823 946 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 EIF2B5Q13144 721 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 CUL4AQ13619 759 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 THEM5Q8N1Q8 247 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 SPATA4Q8NEY3 305 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 KLHL4Q9C0H6 718 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 C20orf96Q9NUD7 363 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 ADAMTS1Q9UHI8 967 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ABCC4O15439 1325 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 PRPF4O43172 522 aaKnown RBP eCLIP5.35□□□□□ -1.553e-7■■■□□ 15.3
SMG1-211ENST00000565324 USP1O94782 785 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TTKP33981 857 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 KDSRQ06136 332 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ABCB5Q2M3G0 1257 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 CDYLQ9Y232 598 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 SYNCRIPO60506 623 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 SNUPNO95149 360 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 PSAPP07602 524 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 OSBPP22059 807 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 CCT8P50990 548 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ARSEP51690 589 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ILF2Q12905 390 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 ARMC4Q5T2S8 1044 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 PDZK1Q5T2W1 519 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 FBXW10Q5XX13 1052 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 JADE3Q92613 823 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 EEF2KMTQ96G04 330 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 SPRTNQ9H040 489 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 TUFT1Q9NNX1 390 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 EXOSC4Q9NPD3 245 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 BTBD7Q9P203 1132 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 HUS1O60921 280 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms