RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PLCG1P19174 1290 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 LONP1P36776 959 aaKnown RBP21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 GLUD2P49448 558 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 TUSC3Q13454 348 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 KARSQ15046 597 aaKnown RBP21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 TPRNQ4KMQ1 711 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 KANK3Q6NY19 840 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 CEP120Q8N960 986 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 RPGRIP1Q96KN7 1286 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 B3GALT6Q96L58 329 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 ACO2Q99798 780 aaKnown RBP21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 TARS2Q9BW92 718 aaKnown RBP21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 MRPL4Q9BYD3 311 aaKnown RBP21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 GPR62Q9BZJ7 368 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 CDT1Q9H211 546 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 C17orf75Q9HAS0 396 aa21.95■■□□□ 1.1
SHCBP1-203ENST00000564272 LOC730098B7Z3J9 87 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 DCXO43602 365 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 WEE2P0C1S8 567 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 KLRC2P26717 231 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 HSP90AA2PQ14568 343 aaPredicted RBP21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 PTPAQ15257 358 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 ZNF568Q3ZCX4 644 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 ARSHQ5FYA8 562 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 TMEM31Q5JXX7 168 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 RARS2Q5T160 578 aaKnown RBP21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 FUT10Q6P4F1 479 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 ZBTB33Q86T24 672 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 GPBP1Q86WP2 473 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 RNF135Q8IUD6 432 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 RASSF8Q8NHQ8 419 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 FEZF2Q8TBJ5 459 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 PTPRHQ9HD43 1115 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 BLOC1S4Q9NUP1 217 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 DZANK1Q9NVP4 752 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 KCND2Q9NZV8 630 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 MUTYHQ9UIF7 546 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 ADAM28Q9UKQ2 775 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 MTMR6Q9Y217 621 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 RBM19Q9Y4C8 960 aaKnown RBP21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 GTF3C3Q9Y5Q9 886 aa21.94■■□□□ 1.1
SHCBP1-203ENST00000564272 THP07101 528 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 ALADP13716 330 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 SP100P23497 879 aaPredicted RBP21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 MARCKSP29966 332 aaPredicted RBP21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 CLCN4P51793 760 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 DHX8Q14562 1220 aaKnown RBP21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 NAB2Q15742 525 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 GLRA4Q5JXX5 417 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 KIAA0319Q5VV43 1072 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 APBB1IPQ7Z5R6 666 aaPredicted RBP21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 PPFIBP1Q86W92 1011 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 TMEM161BQ8NDZ6 487 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 HASPINQ8TF76 798 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 SPIRE2Q8WWL2 714 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 LRFN3Q9BTN0 628 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 ADAM7Q9H2U9 754 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 RAPGEFL1Q9UHV5 662 aa21.93■■□□□ 1.1
SHCBP1-203ENST00000564272 PLXNA3P51805 1871 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 KIF4AO95239 1232 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 COL9A1P20849 921 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 OSTNP61366 133 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 DSG1Q02413 1049 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 CEBPZQ03701 1054 aaKnown RBP21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 ITIH3Q06033 890 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 MCM6Q14566 821 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 SPECC1Q5M775 1068 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 KIAA1841Q6NSI8 718 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 CES5AQ6NT32 575 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 FBXL18Q96ME1 805 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 REEP2Q9BRK0 252 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 NTPCRQ9BSD7 190 aaKnown RBP21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 FBXO2Q9UK22 296 aaPredicted RBP21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 TRIP11Q15643 1979 aa21.92■■□□□ 1.1
SHCBP1-203ENST00000564272 ABLIM1O14639 778 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 TEX28O15482 410 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 TADA2AO75478 443 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 MAPTP10636 758 aaKnown RBP21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 HARSP12081 509 aaKnown RBP21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 PROZP22891 400 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 GRM5P41594 1212 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 MPZL3Q6UWV2 235 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 USP49Q70CQ1 688 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 RAD54LQ92698 747 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 EPSTI1Q96J88 318 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 POMKQ9H5K3 350 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 CHST7Q9NS84 486 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 SSX2IPQ9Y2D8 614 aa21.91■■□□□ 1.1
SHCBP1-203ENST00000564272 SF3B1O75533 1304 aaKnown RBP eCLIP21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 STX6O43752 255 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 GPR37L1O60883 481 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 ADH1AP07327 375 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 MCF2P10911 925 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 SMTNP53814 917 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 STRN3Q13033 797 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 SNX21Q969T3 373 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 ZBTB45Q96K62 511 aaPredicted RBP21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 CLIC6Q96NY7 704 aa21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 PPP1R10Q96QC0 940 aaKnown RBP21.9■■□□□ 1.1
SHCBP1-203ENST00000564272 TCHPQ9BT92 498 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms