RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 COL4A3Q01955 1670 aa11.4□□□□□ -0.59
BBS4-205ENST00000562219 A0A1B0GUA9 196 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 FAM205CA6NFA0 338 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 ZMYND10O75800 440 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 NPTXRO95502 500 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 RPL17P18621 184 aaKnown RBP11.39□□□□□ -0.59
BBS4-205ENST00000562219 GLRA2P23416 452 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 HSP90AA2PQ14568 343 aaPredicted RBP11.39□□□□□ -0.59
BBS4-205ENST00000562219 PDCD11Q14690 1871 aaKnown RBP11.39□□□□□ -0.59
BBS4-205ENST00000562219 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
BBS4-205ENST00000562219 SPECC1Q5M775 1068 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 HSD17B14Q9BPX1 270 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 EIF2AK1Q9BQI3 630 aaKnown RBP11.39□□□□□ -0.59
BBS4-205ENST00000562219 GJB4Q9NTQ9 266 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 PDRG1Q9NUG6 133 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 PCDHA12Q9UN75 941 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 SIT1Q9Y3P8 196 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 NUMBLQ9Y6R0 609 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 R4GN57 208 aa11.39□□□□□ -0.59
BBS4-205ENST00000562219 TADA2AO75478 443 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 DCNP07585 359 aaKnown RBP11.38□□□□□ -0.59
BBS4-205ENST00000562219 FSHRP23945 695 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 KRT2P35908 639 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 RARRES1P49788 294 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 NR5A1Q13285 461 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 TUSC3Q13454 348 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 CALCRLQ16602 461 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 RTP2Q5QGT7 225 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 LIN9Q5TKA1 542 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 DCLRE1AQ6PJP8 1040 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 POTEGQ6S5H5 508 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 PRSS55Q6UWB4 352 aaPredicted RBP11.38□□□□□ -0.59
BBS4-205ENST00000562219 CDR2LQ86X02 465 aaPredicted RBP11.38□□□□□ -0.59
BBS4-205ENST00000562219 PJA1Q8NG27 643 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 WASF1Q92558 559 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 RABGGTAQ92696 567 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 SHDQ96IW2 340 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 POLR3FQ9H1D9 316 aaPredicted RBP11.38□□□□□ -0.59
BBS4-205ENST00000562219 BRMS1Q9HCU9 246 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 KLK14Q9P0G3 267 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 DLGAP2Q9P1A6 1054 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 PARP2Q9UGN5 583 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 FBXW11Q9UKB1 542 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 DNAH14Q0VDD8 3507 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 CEP250Q9BV73 2442 aa11.38□□□□□ -0.59
BBS4-205ENST00000562219 LRRIQ4A6NIV6 560 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 PFKFB2O60825 505 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 KIF4AO95239 1232 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 HNRNPA1P09651 372 aaKnown RBP eCLIP11.37□□□□□ -0.59
BBS4-205ENST00000562219 STARD6P59095 220 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 PSMD5Q16401 504 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 PPM1LQ5SGD2 360 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 CDCA2Q69YH5 1023 aaPredicted RBP11.37□□□□□ -0.59
BBS4-205ENST00000562219 PPP4R3CPQ6ZMV5 832 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 C1orf210Q8IVY1 113 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 HASPINQ8TF76 798 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 PIK3R5Q8WYR1 880 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 FGF14Q92915 247 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 TNFRSF25Q93038 417 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 PRIMPOLQ96LW4 560 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 PAAF1Q9BRP4 392 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 TTPALQ9BTX7 342 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 FOXQ1Q9C009 403 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 TTC12Q9H892 705 aaPredicted RBP11.37□□□□□ -0.59
BBS4-205ENST00000562219 PRMT7Q9NVM4 692 aaPredicted RBP11.37□□□□□ -0.59
BBS4-205ENST00000562219 ORC3Q9UBD5 711 aaPredicted RBP11.37□□□□□ -0.59
BBS4-205ENST00000562219 CDH7Q9ULB5 785 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 TPCN1Q9ULQ1 816 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 MYH11P35749 1972 aa11.37□□□□□ -0.59
BBS4-205ENST00000562219 CASTOR2A6NHX0 329 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 NEMFO60524 1076 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 USO1O60763 962 aaKnown RBP11.36□□□□□ -0.59
BBS4-205ENST00000562219 CTDNEP1O95476 244 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 C8AP07357 584 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 SP9P0CG40 484 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 HOXA9P31269 272 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 ELAVL2Q12926 359 aaKnown RBP11.36□□□□□ -0.59
BBS4-205ENST00000562219 FAM187BQ17R55 369 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 FAM171A1Q5VUB5 890 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 PDXDC1Q6P996 788 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 PARM1Q6UWI2 310 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 MTSS1LQ765P7 747 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 GRASPQ7Z6J2 395 aaPredicted RBP11.36□□□□□ -0.59
BBS4-205ENST00000562219 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 MCPH1Q8NEM0 835 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 ST13P5Q8NFI4 369 aaPredicted RBP11.36□□□□□ -0.59
BBS4-205ENST00000562219 PIGOQ8TEQ8 1089 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 FGF13Q92913 245 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 RMDN1Q96DB5 314 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 HINFPQ9BQA5 517 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 CLSTN3Q9BQT9 956 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 TICRRQ7Z2Z1 1910 aa11.36□□□□□ -0.59
BBS4-205ENST00000562219 COL4A2P08572 1712 aa11.35□□□□□ -0.59
BBS4-205ENST00000562219 POTEMA6NI47 508 aa11.35□□□□□ -0.59
BBS4-205ENST00000562219 PTGESO14684 152 aa11.35□□□□□ -0.59
BBS4-205ENST00000562219 N4BP3O15049 544 aa11.35□□□□□ -0.59
BBS4-205ENST00000562219 CCL16O15467 120 aa11.35□□□□□ -0.59
BBS4-205ENST00000562219 DTNBO60941 627 aa11.35□□□□□ -0.59
BBS4-205ENST00000562219 XYLBO75191 536 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms