RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 KCNG1Q9UIX4 513 aa8.21□□□□□ -1.1
TPM1-231ENST00000561395 ZHX1Q9UKY1 873 aaPredicted RBP8.21□□□□□ -1.1
TPM1-231ENST00000561395 EXOC7Q9UPT5 735 aa8.21□□□□□ -1.1
TPM1-231ENST00000561395 SIK3Q9Y2K2 1263 aa8.21□□□□□ -1.1
TPM1-231ENST00000561395 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.21□□□□□ -1.1
TPM1-231ENST00000561395 C5orf42Q9H799 3197 aa8.21□□□□□ -1.1
TPM1-231ENST00000561395 TECTAO75443 2155 aa8.21□□□□□ -1.1
TPM1-231ENST00000561395 IGKV6-21A0A0C4DH24 114 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 A0A1W2PQJ5 194 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 TTC26A0AVF1 554 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 RNF225M0QZC1 329 aaPredicted RBP8.2□□□□□ -1.1
TPM1-231ENST00000561395 ADCY6O43306 1168 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 HBP1O60381 514 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 STX10O60499 249 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 DUSP11O75319 330 aaKnown RBP8.2□□□□□ -1.1
TPM1-231ENST00000561395 MMP3P08254 477 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 ZNF286BP0CG31 522 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 ALADP13716 330 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 GLRA2P23416 452 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 PSMC2P35998 433 aaKnown RBP8.2□□□□□ -1.1
TPM1-231ENST00000561395 KLK7P49862 253 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 CYP2J2P51589 502 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 NOLC1Q14978 699 aaKnown RBP eCLIP8.2□□□□□ -1.1
TPM1-231ENST00000561395 PPP2R5AQ15172 486 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 TAS1R3Q7RTX0 852 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 EXOC8Q8IYI6 725 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 PHOX2BQ99453 314 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 BAG1Q99933 345 aaPredicted RBP8.2□□□□□ -1.1
TPM1-231ENST00000561395 JPH2Q9BR39 696 aaPredicted RBP8.2□□□□□ -1.1
TPM1-231ENST00000561395 NUP58Q9BVL2 599 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 NAA15Q9BXJ9 866 aaKnown RBP8.2□□□□□ -1.1
TPM1-231ENST00000561395 SEZ6LQ9BYH1 1024 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 WNT8AQ9H1J5 351 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 KCND1Q9NSA2 647 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 ABHD10Q9NUJ1 306 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 CAPN11Q9UMQ6 739 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 FRMD4BQ9Y2L6 1034 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 COL1A2P08123 1366 aa8.2□□□□□ -1.1
TPM1-231ENST00000561395 SCN10AQ9Y5Y9 1956 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 MICAL3Q7RTP6 2002 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 TISP43B9A030 160 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 MAPK13O15264 365 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 ARHGAP6O43182 974 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 ZEB2O60315 1214 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 PPFIA4O75335 1185 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 ARHGEF15O94989 841 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 AFPP02771 609 aaKnown RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 TRIM21P19474 475 aaKnown RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 KRT9P35527 623 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 TNFAIP2Q03169 654 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 TAP1Q03518 808 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 KCNH2Q12809 1159 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 CAPSQ13938 189 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 DCAF17Q5H9S7 520 aaPredicted RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 ZNF484Q5JVG2 852 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 IER5Q5VY09 327 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 CDCA2Q69YH5 1023 aaPredicted RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 SLC39A4Q6P5W5 647 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 RPUSD2Q8IZ73 545 aaKnown RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 PDCD7Q8N8D1 485 aaKnown RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 XXYLT1Q8NBI6 393 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 DEPTORQ8TB45 409 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 CPLX3Q8WVH0 158 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 TCP11Q8WWU5 503 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 SLC35C1Q96A29 364 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 PCMTD1Q96MG8 357 aaPredicted RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 DNAJC7Q99615 494 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 CBWD1Q9BRT8 395 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 UPF3AQ9H1J1 476 aaKnown RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 UBE2ZQ9H832 354 aaPredicted RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 HSPBP1Q9NZL4 362 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 ZNF215Q9UL58 517 aaPredicted RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 LUC7L2Q9Y383 392 aaKnown RBP8.19□□□□□ -1.1
TPM1-231ENST00000561395 PHLPP2Q6ZVD8 1323 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 RALGAPA2Q2PPJ7 1873 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 EVPLQ92817 2033 aa8.19□□□□□ -1.1
TPM1-231ENST00000561395 GTPBP10A4D1E9 387 aaKnown RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 LRRIQ4A6NIV6 560 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 ANKRD63C9JTQ0 380 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 HNRNPDLO14979 420 aaKnown RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 EPHB6O15197 1021 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 DCXO43602 365 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 EXOC3O60645 756 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 LPXNO60711 386 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 C22orf31O95567 290 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 PIGRP01833 764 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 IL9P15248 144 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 GARTP22102 1010 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 ADSSP30520 456 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 GJA9P57773 515 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 ZBED6P86452 979 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 LAMTOR4Q0VGL1 99 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 KCNMA1Q12791 1236 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 BFSP1Q12934 665 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 DRP2Q13474 957 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 MXD4Q14582 209 aaPredicted RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 DGKDQ16760 1214 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 BRDTQ58F21 947 aaPredicted RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 GNASQ5JWF2 1037 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 890 ms