RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PRPF6O94906 941 aaKnown RBP11.9□□□□□ -0.5
SHMT2-218ENST00000555213 EDN1P05305 212 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 FGFR1P11362 822 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 ATP1A3P13637 1013 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 PROZP22891 400 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 DNAJB2P25686 324 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 RABGGTBP53611 331 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 HTRA4P83105 476 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-218ENST00000555213 MYL5Q02045 173 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 MCL1Q07820 350 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 BTG3Q14201 252 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-218ENST00000555213 BMT2Q1RMZ1 405 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 EEF1DP3Q658K8 133 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 ANKRD40Q6AI12 368 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 TTI2Q6NXR4 508 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 SARM1Q6SZW1 724 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 MRPL10Q7Z7H8 261 aaKnown RBP11.9□□□□□ -0.5
SHMT2-218ENST00000555213 GUF1Q8N442 669 aaKnown RBP11.9□□□□□ -0.5
SHMT2-218ENST00000555213 SCFD1Q8WVM8 642 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 NELFBQ8WX92 580 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 TIFAQ96CG3 184 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 DHTKD1Q96HY7 919 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-218ENST00000555213 RPS6KC1Q96S38 1066 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 MSTO1Q9BUK6 570 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 APOL6Q9BWW8 343 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 PBX4Q9BYU1 374 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 GBP3Q9H0R5 595 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 CDT1Q9H211 546 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 SLC28A3Q9HAS3 691 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 PTPRHQ9HD43 1115 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 PARP2Q9UGN5 583 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 DACH1Q9UI36 760 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 USP20Q9Y2K6 914 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 GIT1Q9Y2X7 761 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 SZT2Q5T011 3432 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 COL4A6Q14031 1691 aa11.9□□□□□ -0.5
SHMT2-218ENST00000555213 TMEM265A0A087WTH1 108 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 CARNS1A5YM72 827 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 TRIM49BA6NDI0 452 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 BECN2A8MW95 431 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 DLL1O00548 723 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 KIAA0391O15091 583 aaKnown RBP11.89□□□□□ -0.51
SHMT2-218ENST00000555213 ADCY5O95622 1261 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 CA3P07451 260 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 ATF7P17544 494 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-218ENST00000555213 CCNE1P24864 410 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 PPP1R2P41236 205 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 GRM5P41594 1212 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 SNRPFP62306 86 aaKnown RBP11.89□□□□□ -0.51
SHMT2-218ENST00000555213 STIM1Q13586 685 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 PAN2Q504Q3 1202 aaKnown RBP11.89□□□□□ -0.51
SHMT2-218ENST00000555213 CDKAL1Q5VV42 579 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 KLHL10Q6JEL2 608 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 NELFCDQ8IXH7 590 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 CRIPAKQ8N1N5 446 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 FIBCD1Q8N539 461 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
SHMT2-218ENST00000555213 ZNF507Q8TCN5 953 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 POMGNT1Q8WZA1 660 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 LPPQ93052 612 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 CGNQ9P2M7 1197 aaKnown RBP11.89□□□□□ -0.51
SHMT2-218ENST00000555213 KANSL3Q9P2N6 904 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 CTNND2Q9UQB3 1225 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 RWDD3Q9Y3V2 267 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 NFE2L3Q9Y4A8 694 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 HES2Q9Y543 173 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 TTC3P53804 2025 aa11.89□□□□□ -0.51
SHMT2-218ENST00000555213 A0A0B4J269 797 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 LRRC10BA6NIK2 292 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 RBAK-RBAKDNI3L0D1 243 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 OGTO15294 1046 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 RECQL4O94761 1208 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 GARTP22102 1010 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 MLH1P40692 756 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 ZNF75DP51815 510 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 RNASELQ05823 741 aaKnown RBP11.88□□□□□ -0.51
SHMT2-218ENST00000555213 KCNA1Q09470 495 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 PAK1Q13153 545 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 KNOP1Q1ED39 458 aaKnown RBP11.88□□□□□ -0.51
SHMT2-218ENST00000555213 ZCWPW2Q504Y3 356 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 NOMO2Q5JPE7 1267 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 CLLU1OSQ5K130 101 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 SPOUT1Q5T280 376 aaKnown RBP11.88□□□□□ -0.51
SHMT2-218ENST00000555213 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 THNSL1Q8IYQ7 743 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-218ENST00000555213 P2RX5Q93086 422 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 ZNF689Q96CS4 500 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-218ENST00000555213 NAP1L5Q96NT1 182 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-218ENST00000555213 ACAP3Q96P50 834 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 NKX2-4Q9H2Z4 354 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 KCTD10Q9H3F6 313 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 RC3H2Q9HBD1 1191 aaKnown RBP11.88□□□□□ -0.51
SHMT2-218ENST00000555213 AAASQ9NRG9 546 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 AGO2Q9UKV8 859 aaKnown RBP11.88□□□□□ -0.51
SHMT2-218ENST00000555213 STYXL1Q9Y6J8 313 aa11.88□□□□□ -0.51
SHMT2-218ENST00000555213 ARL5CA6NH57 179 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms