RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 EPHB4P54760 987 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 PPP2CBP62714 309 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 PPP2CAP67775 309 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 KCNAB2Q13303 367 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 NCAPHQ15003 741 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 WDR43Q15061 677 aaKnown RBP eCLIP3.97□□□□□ -1.77
SLIRP-202ENST00000553981 ZNF585AQ6P3V2 769 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 TEPPQ6URK8 271 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 ATG9AQ7Z3C6 839 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 ZNF804AQ7Z570 1209 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 ANKRD23Q86SG2 305 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 CIR1Q86X95 450 aaPredicted RBP3.97□□□□□ -1.77
SLIRP-202ENST00000553981 NT5DC4Q86YG4 428 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 RCBTB1Q8NDN9 531 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 SLC17A8Q8NDX2 589 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 PAWRQ96IZ0 340 aaKnown RBP3.97□□□□□ -1.77
SLIRP-202ENST00000553981 SEC16BQ96JE7 1060 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 GUCD1Q96NT3 240 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 CLIC6Q96NY7 704 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 CDK5RAP1Q96SZ6 601 aaKnown RBP3.97□□□□□ -1.77
SLIRP-202ENST00000553981 ZNF747Q9BV97 191 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 MTMR10Q9NXD2 777 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 CROTQ9UKG9 612 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 COA3Q9Y2R0 106 aaPredicted RBP3.97□□□□□ -1.77
SLIRP-202ENST00000553981 AFG3L2Q9Y4W6 797 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 PCDHB4Q9Y5E5 795 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 DDX60LQ5H9U9 1706 aaKnown RBP3.97□□□□□ -1.77
SLIRP-202ENST00000553981 AK9Q5TCS8 1911 aa3.97□□□□□ -1.77
SLIRP-202ENST00000553981 CACNA1FO60840 1977 aa3.96□□□□□ -1.77
SLIRP-202ENST00000553981 DOCK2Q92608 1830 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 H7BY64 318 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 WDHD1O75717 1129 aaPredicted RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 PDE8BO95263 885 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 SCG5P05408 212 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 ITGAVP06756 1048 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 SNRPB2P08579 225 aaKnown RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 CETPP11597 493 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 LCP1P13796 627 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 PHKA1P46020 1223 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 HDLBPQ00341 1268 aaKnown RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 PPATQ06203 517 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 NEXNQ0ZGT2 675 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 SNAPC2Q13487 334 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 TESK1Q15569 626 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 SF1Q15637 639 aaKnown RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 PRSS53Q2L4Q9 553 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 EMC4Q5J8M3 183 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 ACBD5Q5T8D3 534 aaPredicted RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 TMCO4Q5TGY1 634 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 STEAP3Q658P3 488 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 OTUD7BQ6GQQ9 843 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 ARHGEF18Q6ZSZ5 1173 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 FAM83AQ86UY5 434 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 ZNF227Q86WZ6 799 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 PALM2Q8IXS6 379 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 KBTBD2Q8IY47 623 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 KLHL36Q8N4N3 616 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 FAM151AQ8WW52 585 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 ANAPC16Q96DE5 110 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 WWC2-AS2Q96NR7 200 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 DEFB118Q96PH6 123 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 MRIQ9BWK5 157 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 USP44Q9H0E7 712 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 VPS11Q9H270 941 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 TXNRD2Q9NNW7 524 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 CNNM1Q9NRU3 951 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 STRIP2Q9ULQ0 834 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 PA2G4Q9UQ80 394 aaKnown RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 TNNQ9UQP3 1299 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 PCDHA2Q9Y5H9 948 aa3.96□□□□□ -1.78
SLIRP-202ENST00000553981 RPAP1Q9BWH6 1393 aaPredicted RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 COL2A1P02458 1487 aaPredicted RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 MYO5AQ9Y4I1 1855 aaKnown RBP3.96□□□□□ -1.78
SLIRP-202ENST00000553981 ZNF521Q96K83 1311 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 FRMPD3Q5JV73 1810 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 MYH2Q9UKX2 1941 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 DOCK1Q14185 1865 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 LOC285556D6RIA3 1793 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 PATE3B3GLJ2 98 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 OVOL3O00110 214 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 ADCY3O60266 1144 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 B4GALT4O60513 344 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 FZD7O75084 574 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 CYP7B1O75881 506 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 AMHP03971 560 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 HSP90B1P14625 803 aaKnown RBP3.95□□□□□ -1.78
SLIRP-202ENST00000553981 RHBDL3P58872 404 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 NFATC3Q12968 1075 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 LSAMPQ13449 338 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 CCL14Q16627 93 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 LRRC26Q2I0M4 334 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 CCDC57Q2TAC2 916 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 DENND5AQ6IQ26 1287 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 TMC5Q6UXY8 1006 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 PPIL6Q8IXY8 311 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 ANKRD13CQ8N6S4 541 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 RAET1EQ8TD07 263 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.95□□□□□ -1.78
SLIRP-202ENST00000553981 TRIB2Q92519 343 aa3.95□□□□□ -1.78
SLIRP-202ENST00000553981 TEKT1Q969V4 418 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms