RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 STK33Q9BYT3 514 aa13□□□□□ -0.33
SPTB-206ENST00000553938 KLHL11Q9NVR0 708 aa13□□□□□ -0.33
SPTB-206ENST00000553938 PNMA3Q9UL41 463 aa13□□□□□ -0.33
SPTB-206ENST00000553938 K7ENM7 598 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 BBOX1O75936 387 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 RARAP10276 462 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 GNAT1P11488 350 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 LRIG3Q6UXM1 1119 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 CBWD2Q8IUF1 395 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 TCP11Q8WWU5 503 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 CHST7Q9NS84 486 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPTB-206ENST00000553938 NPEPPSP55786 919 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 KCNJ2P63252 427 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 TMEM62Q0P6H9 643 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 BFSP1Q12934 665 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 BMT2Q1RMZ1 405 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 ZNF280DQ6N043 979 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 CCDC137Q6PK04 289 aaKnown RBP12.99□□□□□ -0.33
SPTB-206ENST00000553938 NCAPG2Q86XI2 1143 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 SLF2Q8IX21 1173 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 ANKRD42Q8N9B4 389 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 AGBL1Q96MI9 1066 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 AAASQ9NRG9 546 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 KLHL42Q9P2K6 505 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 SWAP70Q9UH65 585 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 R3HDM2Q9Y2K5 976 aaKnown RBP12.99□□□□□ -0.33
SPTB-206ENST00000553938 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
SPTB-206ENST00000553938 GAS7O60861 476 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 BMP3P12645 472 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 FERP16591 822 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 HSPA1LP34931 641 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 ERMARDQ5T6L9 678 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 TBC1D1Q86TI0 1168 aaPredicted RBP12.98□□□□□ -0.33
SPTB-206ENST00000553938 CACNA2D3Q8IZS8 1091 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 PPM1KQ8N3J5 372 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 MAB21L3Q8N8X9 362 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 ERMNQ8TAM6 284 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 LBHD1Q9BQE6 289 aaPredicted RBP12.98□□□□□ -0.33
SPTB-206ENST00000553938 HEMGNQ9BXL5 484 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 COA1Q9GZY4 146 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 PCDHGA4Q9Y5G9 962 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 PFASO15067 1338 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 TMEM253P0C7T8 217 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 ITGB5P18084 799 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 CHRNA5P30532 468 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 GJC1P36383 396 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
SPTB-206ENST00000553938 AOC3Q16853 763 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 CAPN12Q6ZSI9 719 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 TAX1BP1Q86VP1 789 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 ANKRD13AQ8IZ07 590 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 PAPOLBQ9NRJ5 636 aaKnown RBP12.98□□□□□ -0.33
SPTB-206ENST00000553938 BLOC1S6Q9UL45 172 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 NCANO14594 1321 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 VIMP08670 466 aaKnown RBP12.98□□□□□ -0.33
SPTB-206ENST00000553938 WNT7BP56706 349 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 SIX1Q15475 284 aaPredicted RBP12.98□□□□□ -0.33
SPTB-206ENST00000553938 HIBCHQ6NVY1 386 aaPredicted RBP12.98□□□□□ -0.33
SPTB-206ENST00000553938 MICALCLQ6ZW33 695 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 MRRFQ96E11 262 aaKnown RBP12.98□□□□□ -0.33
SPTB-206ENST00000553938 CSRNP1Q96S65 589 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 FGFR1OP2Q9NVK5 253 aa12.98□□□□□ -0.33
SPTB-206ENST00000553938 SLC16A4O15374 487 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 TMEM130Q8N3G9 435 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 POMGNT1Q8WZA1 660 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 FAM129AQ9BZQ8 928 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 MAF1Q9H063 256 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 SLITRK6Q9H5Y7 841 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 BZW2Q9Y6E2 419 aaKnown RBP12.97□□□□□ -0.33
SPTB-206ENST00000553938 CARNS1A5YM72 827 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 CCDC188H7C350 402 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 NFIBO00712 420 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 SMIM24O75264 130 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 RPL13P26373 211 aaKnown RBP12.97□□□□□ -0.33
SPTB-206ENST00000553938 PEX5P50542 639 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 RNASELQ05823 741 aaKnown RBP12.97□□□□□ -0.33
SPTB-206ENST00000553938 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 CCDC105Q8IYK2 499 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 CHMP6Q96FZ7 201 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 ZNF577Q9BSK1 485 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 PABPC3Q9H361 631 aaKnown RBP12.97□□□□□ -0.33
SPTB-206ENST00000553938 PIDD1Q9HB75 910 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 OLFML3Q9NRN5 406 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 SMNDC1O75940 238 aaKnown RBP eCLIP12.97□□□□□ -0.33
SPTB-206ENST00000553938 CLTAP09496 248 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 NEFHP12036 1026 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 HOXA10P31260 410 aaPredicted RBP12.97□□□□□ -0.33
SPTB-206ENST00000553938 FOXR2Q6PJQ5 311 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
SPTB-206ENST00000553938 NEK9Q8TD19 979 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 EPS8L1Q8TE68 723 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 DMAC2Q9NW81 257 aa12.97□□□□□ -0.33
SPTB-206ENST00000553938 CTDP1Q9Y5B0 961 aaPredicted RBP12.97□□□□□ -0.33
SPTB-206ENST00000553938 ANP32DO95626 131 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms