RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 RNF180Q86T96 592 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 CILP2Q8IUL8 1156 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 REXO1Q8N1G1 1221 aaKnown RBP6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 ZNF713Q8N859 430 aaPredicted RBP6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 NSUN7Q8NE18 718 aaKnown RBP6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 CCDC148Q8NFR7 591 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 SCFD2Q8WU76 684 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 IWS1Q96ST2 819 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 ALG1Q9BT22 464 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 ALDH8A1Q9H2A2 487 aaPredicted RBP6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 NRBP1Q9UHY1 535 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 ATP11BQ9Y2G3 1177 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 SNX11Q9Y5W9 270 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 TET1Q8NFU7 2136 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
EFCAB2-215ENST00000549220 TMEM265A0A087WTH1 108 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 A0A1W2PQ45 241 aaPredicted RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 A0A1W2PQY0 241 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 DDX39AO00148 427 aaKnown RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 DNM1LO00429 736 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 FANCGO15287 622 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 EIF3JO75822 258 aaKnown RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 SLITRK5O94991 958 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 GGPS1O95749 300 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 ASGR1P07306 291 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 SYN1P17600 705 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 XBP1P17861 261 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 EDNRBP24530 442 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 GNA11P29992 359 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 ACLYP53396 1101 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 PSMC6P62333 389 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 MRPS9P82933 396 aaKnown RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 ST3GAL1Q11201 340 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 SLBPQ14493 270 aaKnown RBP eCLIP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 DUSP28Q4G0W2 176 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 FAM47CQ5HY64 1035 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 CXCL17Q6UXB2 119 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 DHX37Q8IY37 1157 aaKnown RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 SAMD3Q8N6K7 520 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 FAM184AQ8NB25 1140 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 MORC4Q8TE76 937 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 AFG1LQ8WV93 481 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 ZSCAN31Q96LW9 406 aaPredicted RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 HTATIP2Q9BUP3 242 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 FBRSQ9HAH7 460 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 MLXIPQ9HAP2 919 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 PRDM5Q9NQX1 630 aaPredicted RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 STARD7Q9NQZ5 370 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 RNF19AQ9NV58 838 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 MAP3K20Q9NYL2 800 aaKnown RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 ZMYND8Q9ULU4 1186 aaPredicted RBP6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 STK36Q9NRP7 1315 aa6.67□□□□□ -1.34
EFCAB2-215ENST00000549220 PTPRSQ13332 1948 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 MICAL3Q7RTP6 2002 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 LOC102724159A0A0B4J2E5 919 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 CCDC194A0A1B0GVG4 234 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 ZEB2O60315 1214 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 PQBP1O60828 265 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 GH1P01241 217 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 P4HBP07237 508 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 ZNF286BP0CG31 522 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 ATP2B1P20020 1258 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 UBA1P22314 1058 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 GJA9P57773 515 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 RTP1P59025 263 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 SP2Q02086 613 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 MTMR1Q13613 665 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 GNL2Q13823 731 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 PWP2Q15269 919 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 LRRC26Q2I0M4 334 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 GNPTABQ3T906 1256 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 TRIM60Q495X7 471 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 BRDTQ58F21 947 aaPredicted RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 UTP14CQ5TAP6 766 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 PCNX4Q63HM2 1172 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 LRFN4Q6PJG9 635 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 NLRX1Q86UT6 975 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 BLIDQ8IZY5 108 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 PCSK9Q8NBP7 692 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 CYP2W1Q8TAV3 490 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 BICD2Q8TD16 824 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 WASF1Q92558 559 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 IL17RAQ96F46 866 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 TMX3Q96JJ7 454 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 HRASLS5Q96KN8 279 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 GLT1D1Q96MS3 346 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 ZMYND12Q9H0C1 365 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 GLT8D2Q9H1C3 349 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 BCAS3Q9H6U6 928 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 C12orf49Q9H741 205 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 RC3H2Q9HBD1 1191 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 PRDM7Q9NQW5 492 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 SEMA3GQ9NS98 782 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 DDX41Q9UJV9 622 aaKnown RBP6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 PCDHA4Q9UN74 947 aa6.66□□□□□ -1.34
EFCAB2-215ENST00000549220 TRIOBPQ9H2D6 2365 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms