RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 PCDHA12Q9UN75 941 aa22.23■■□□□ 1.15
GATC-202ENST00000548171 R4GN57 208 aa22.23■■□□□ 1.15
GATC-202ENST00000548171 HNRNPA1P09651 372 aaKnown RBP eCLIP22.22■■□□□ 1.15
GATC-202ENST00000548171 TUSC3Q13454 348 aa22.22■■□□□ 1.15
GATC-202ENST00000548171 HSP90AA2PQ14568 343 aaPredicted RBP22.22■■□□□ 1.15
GATC-202ENST00000548171 SPECC1Q5M775 1068 aa22.22■■□□□ 1.15
GATC-202ENST00000548171 C1orf210Q8IVY1 113 aa22.22■■□□□ 1.15
GATC-202ENST00000548171 EIF2AK1Q9BQI3 630 aaKnown RBP22.22■■□□□ 1.15
GATC-202ENST00000548171 PDRG1Q9NUG6 133 aa22.22■■□□□ 1.15
GATC-202ENST00000548171 B4GALT5O43286 388 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 NPTXRO95502 500 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 DCNP07585 359 aaKnown RBP22.21■■□□□ 1.15
GATC-202ENST00000548171 RPL17P18621 184 aaKnown RBP22.21■■□□□ 1.15
GATC-202ENST00000548171 GLRA2P23416 452 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 STARD6P59095 220 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 SCRN1Q12765 414 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 LIN9Q5TKA1 542 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 POTEGQ6S5H5 508 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 PJA1Q8NG27 643 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 PRIMPOLQ96LW4 560 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 PARP2Q9UGN5 583 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 FBXW11Q9UKB1 542 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 CDH7Q9ULB5 785 aa22.21■■□□□ 1.15
GATC-202ENST00000548171 PATJQ8NI35 1801 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 VWA8A3KMH1 1905 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 SP9P0CG40 484 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 XRCC6P12956 609 aaKnown RBP eCLIP22.2■■□□□ 1.14
GATC-202ENST00000548171 HOXA9P31269 272 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 RARRES1P49788 294 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 RTP2Q5QGT7 225 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 MTSS1LQ765P7 747 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 PIK3R5Q8WYR1 880 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 WASF1Q92558 559 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 BORCS6Q96GS4 357 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 TTPALQ9BTX7 342 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 KLK14Q9P0G3 267 aa22.2■■□□□ 1.14
GATC-202ENST00000548171 EARS2Q5JPH6 523 aaKnown RBP22.19■■□□□ 1.14
GATC-202ENST00000548171 PDXDC1Q6P996 788 aa22.19■■□□□ 1.14
GATC-202ENST00000548171 PRSS55Q6UWB4 352 aaPredicted RBP22.19■■□□□ 1.14
GATC-202ENST00000548171 PPP4R3CPQ6ZMV5 832 aa22.19■■□□□ 1.14
GATC-202ENST00000548171 RUBCNQ92622 972 aa22.19■■□□□ 1.14
GATC-202ENST00000548171 CLSTN3Q9BQT9 956 aa22.19■■□□□ 1.14
GATC-202ENST00000548171 POLR3FQ9H1D9 316 aaPredicted RBP22.19■■□□□ 1.14
GATC-202ENST00000548171 BRMS1Q9HCU9 246 aa22.19■■□□□ 1.14
GATC-202ENST00000548171 GJB4Q9NTQ9 266 aa22.19■■□□□ 1.14
GATC-202ENST00000548171 PRMT7Q9NVM4 692 aaPredicted RBP22.19■■□□□ 1.14
GATC-202ENST00000548171 CEP250Q9BV73 2442 aa22.19■■□□□ 1.14
GATC-202ENST00000548171 KRT2P35908 639 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 GPC5P78333 572 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 ELAVL2Q12926 359 aaKnown RBP22.18■■□□□ 1.14
GATC-202ENST00000548171 PSMD5Q16401 504 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 CALCRLQ16602 461 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 PPM1LQ5SGD2 360 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 FAM171A1Q5VUB5 890 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 GRASPQ7Z6J2 395 aaPredicted RBP22.18■■□□□ 1.14
GATC-202ENST00000548171 CDR2LQ86X02 465 aaPredicted RBP22.18■■□□□ 1.14
GATC-202ENST00000548171 KIAA2013Q8IYS2 634 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 RABGGTAQ92696 567 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 FGF14Q92915 247 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 RMDN1Q96DB5 314 aa22.18■■□□□ 1.14
GATC-202ENST00000548171 TTC12Q9H892 705 aaPredicted RBP22.18■■□□□ 1.14
GATC-202ENST00000548171 DAXXQ9UER7 740 aaPredicted RBP22.18■■□□□ 1.14
GATC-202ENST00000548171 PFKFB2O60825 505 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 XYLBO75191 536 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 C8AP07357 584 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 POU2F2P09086 479 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 PRKCQQ04759 706 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 PARM1Q6UWI2 310 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 LNX1Q8TBB1 728 aaPredicted RBP22.17■■□□□ 1.14
GATC-202ENST00000548171 TNFRSF25Q93038 417 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 HINFPQ9BQA5 517 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 PAAF1Q9BRP4 392 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 RPP25Q9BUL9 199 aaKnown RBP22.17■■□□□ 1.14
GATC-202ENST00000548171 FOXQ1Q9C009 403 aa22.17■■□□□ 1.14
GATC-202ENST00000548171 NOTCH4Q99466 2003 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 TRIP11Q15643 1979 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 KANSL1LA0AUZ9 987 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 FAM205CA6NFA0 338 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 LRRIQ4A6NIV6 560 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 KIF4AO95239 1232 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 PUM1Q14671 1186 aaKnown RBP eCLIP22.16■■□□□ 1.14
GATC-202ENST00000548171 FAM187BQ17R55 369 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 UVSSAQ2YD98 709 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 ZNF528Q3MIS6 628 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 CDCA2Q69YH5 1023 aaPredicted RBP22.16■■□□□ 1.14
GATC-202ENST00000548171 RTL10Q7L3V2 364 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 DGLUCYQ7Z3D6 616 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 CEP57Q86XR8 500 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 ZBTB8OSQ8IWT0 167 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 MCPH1Q8NEM0 835 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 FGF13Q92913 245 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 DDX23Q9BUQ8 820 aaKnown RBP22.16■■□□□ 1.14
GATC-202ENST00000548171 BCO2Q9BYV7 579 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 OSBPL6Q9BZF3 934 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 FZD8Q9H461 694 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 ORC3Q9UBD5 711 aaPredicted RBP22.16■■□□□ 1.14
GATC-202ENST00000548171 CACNG4Q9UBN1 327 aa22.16■■□□□ 1.14
GATC-202ENST00000548171 CASTOR2A6NHX0 329 aa22.15■■□□□ 1.14
GATC-202ENST00000548171 N4BP3O15049 544 aa22.15■■□□□ 1.14
GATC-202ENST00000548171 THP07101 528 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms