RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 EIF2AK1Q9BQI3 630 aaKnown RBP18.52■□□□□ 0.56
CPSF7-225ENST00000545934 TRIM6Q9C030 488 aaPredicted RBP18.52■□□□□ 0.56
CPSF7-225ENST00000545934 FBXW11Q9UKB1 542 aa18.52■□□□□ 0.56
CPSF7-225ENST00000545934 NUMBLQ9Y6R0 609 aa18.52■□□□□ 0.56
CPSF7-225ENST00000545934 R4GN57 208 aa18.52■□□□□ 0.56
CPSF7-225ENST00000545934 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
CPSF7-225ENST00000545934 DCNP07585 359 aaKnown RBP18.51■□□□□ 0.55
CPSF7-225ENST00000545934 GLULP15104 373 aa18.51■□□□□ 0.55
CPSF7-225ENST00000545934 STARD6P59095 220 aa18.51■□□□□ 0.55
CPSF7-225ENST00000545934 CDR2LQ86X02 465 aaPredicted RBP18.51■□□□□ 0.55
CPSF7-225ENST00000545934 GLYCTKQ8IVS8 523 aa18.51■□□□□ 0.55
CPSF7-225ENST00000545934 RABGGTAQ92696 567 aa18.51■□□□□ 0.55
CPSF7-225ENST00000545934 PAAF1Q9BRP4 392 aa18.51■□□□□ 0.55
CPSF7-225ENST00000545934 SIT1Q9Y3P8 196 aa18.51■□□□□ 0.55
CPSF7-225ENST00000545934 OTOGLQ3ZCN5 2332 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 MARCH6O60337 910 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 CTDNEP1O95476 244 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 NPTXRO95502 500 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 SP9P0CG40 484 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 XBP1P17861 261 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 RARRES1P49788 294 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 HSP90AA2PQ14568 343 aaPredicted RBP18.5■□□□□ 0.55
CPSF7-225ENST00000545934 DCLRE1AQ6PJP8 1040 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 PRSS55Q6UWB4 352 aaPredicted RBP18.5■□□□□ 0.55
CPSF7-225ENST00000545934 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 PJA1Q8NG27 643 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 PIK3R5Q8WYR1 880 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 FGF14Q92915 247 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 CLSTN3Q9BQT9 956 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 RPP25Q9BUL9 199 aaKnown RBP18.5■□□□□ 0.55
CPSF7-225ENST00000545934 PDRG1Q9NUG6 133 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 KLK14Q9P0G3 267 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 CACNG4Q9UBN1 327 aa18.5■□□□□ 0.55
CPSF7-225ENST00000545934 PDCD11Q14690 1871 aaKnown RBP18.5■□□□□ 0.55
CPSF7-225ENST00000545934 SF3B1O75533 1304 aaKnown RBP eCLIP18.49■□□□□ 0.557e-6■■■■■ 28.7
CPSF7-225ENST00000545934 COL4A2P08572 1712 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 EP300Q09472 2414 aaPredicted RBP18.49■□□□□ 0.55
CPSF7-225ENST00000545934 POTEMA6NI47 508 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 PFKFB2O60825 505 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 TADA2AO75478 443 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 HNRNPA1P09651 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
CPSF7-225ENST00000545934 RFX1P22670 979 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 FSHRP23945 695 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 NR5A1Q13285 461 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 TUSC3Q13454 348 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 NAB2Q15742 525 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 SPECC1Q5M775 1068 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 PARM1Q6UWI2 310 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 C1orf210Q8IVY1 113 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 MAML2Q8IZL2 1156 aaPredicted RBP18.49■□□□□ 0.55
CPSF7-225ENST00000545934 LNX1Q8TBB1 728 aaPredicted RBP18.49■□□□□ 0.55
CPSF7-225ENST00000545934 RMDN1Q96DB5 314 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 DDX23Q9BUQ8 820 aaKnown RBP18.49■□□□□ 0.55
CPSF7-225ENST00000545934 PCDHA12Q9UN75 941 aa18.49■□□□□ 0.55
CPSF7-225ENST00000545934 PTGESO14684 152 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 DTNBO60941 627 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 XRCC6P12956 609 aaKnown RBP eCLIP18.48■□□□□ 0.55
CPSF7-225ENST00000545934 HOXA9P31269 272 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 FAM187BQ17R55 369 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 CDCA2Q69YH5 1023 aaPredicted RBP18.48■□□□□ 0.55
CPSF7-225ENST00000545934 GRASPQ7Z6J2 395 aaPredicted RBP18.48■□□□□ 0.55
CPSF7-225ENST00000545934 ST13P5Q8NFI4 369 aaPredicted RBP18.48■□□□□ 0.55
CPSF7-225ENST00000545934 KCNG4Q8TDN1 519 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 FOXQ1Q9C009 403 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 POLR3FQ9H1D9 316 aaPredicted RBP18.48■□□□□ 0.55
CPSF7-225ENST00000545934 FZD8Q9H461 694 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 CDH7Q9ULB5 785 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 TPCN1Q9ULQ1 816 aa18.48■□□□□ 0.55
CPSF7-225ENST00000545934 KIF4AO95239 1232 aa18.47■□□□□ 0.55
CPSF7-225ENST00000545934 POU2F2P09086 479 aa18.47■□□□□ 0.55
CPSF7-225ENST00000545934 FDPSP14324 419 aaKnown RBP18.47■□□□□ 0.55
CPSF7-225ENST00000545934 GPC5P78333 572 aa18.47■□□□□ 0.55
CPSF7-225ENST00000545934 ZC3H14Q6PJT7 736 aaKnown RBP18.47■□□□□ 0.55
CPSF7-225ENST00000545934 MTMR9Q96QG7 549 aa18.47■□□□□ 0.55
CPSF7-225ENST00000545934 TTPALQ9BTX7 342 aa18.47■□□□□ 0.55
CPSF7-225ENST00000545934 CXCL16Q9H2A7 254 aa18.47■□□□□ 0.55
CPSF7-225ENST00000545934 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
CPSF7-225ENST00000545934 PRMT7Q9NVM4 692 aaPredicted RBP18.47■□□□□ 0.55
CPSF7-225ENST00000545934 PARP2Q9UGN5 583 aa18.47■□□□□ 0.55
CPSF7-225ENST00000545934 CITO14578 2027 aa18.47■□□□□ 0.55
CPSF7-225ENST00000545934 TTLL13PA6NNM8 815 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 WNT7AO00755 349 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 ADAM12O43184 909 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 LRRN2O75325 713 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 C8AP07357 584 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 KRT2P35908 639 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 NTHL1P78549 312 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 PSMD5Q16401 504 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 CALCRLQ16602 461 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 FAM171A1Q5VUB5 890 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 SUMF1Q8NBK3 374 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 PIGOQ8TEQ8 1089 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 FGF13Q92913 245 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 SHDQ96IW2 340 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 GPRC5CQ9NQ84 441 aa18.46■□□□□ 0.55
CPSF7-225ENST00000545934 A0A087WWV3 80 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 KANSL1LA0AUZ9 987 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 CASTOR2A6NHX0 329 aa18.45■□□□□ 0.54
CPSF7-225ENST00000545934 SPATA31C1P0DKV0 1188 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms