RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 LRP3O75074 770 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 STAM2O75886 525 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 CHGBP05060 677 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 FURINP09958 794 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 MYCLP12524 364 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-220ENST00000544550 CCND2P30279 289 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 CD52P31358 61 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 MAGEA9P43362 315 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 MRPS6P82932 125 aaKnown RBP4.71□□□□□ -1.66
SNHG1-220ENST00000544550 SHC2P98077 582 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 ZNF543Q08ER8 600 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 COL9A3Q14050 684 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-220ENST00000544550 CDC37Q16543 378 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-220ENST00000544550 GNPTABQ3T906 1256 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 SPECC1Q5M775 1068 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 RARS2Q5T160 578 aaKnown RBP4.71□□□□□ -1.66
SNHG1-220ENST00000544550 PSAPL1Q6NUJ1 521 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 C20orf204Q6ZNR8 217 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 SV2BQ7L1I2 683 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 HS2ST1Q7LGA3 356 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 CABP7Q86V35 215 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 VSIG10LQ86VR7 867 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 PPFIBP1Q86W92 1011 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 KBTBD3Q8NAB2 608 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 ASAP3Q8TDY4 903 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 LINC01599Q8WXQ3 324 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 BSNDQ8WZ55 320 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 STAMQ92783 540 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 GLG1Q92896 1179 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 OSBP2Q969R2 916 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 SHDQ96IW2 340 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 TMEM47Q9BQJ4 181 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 PDCD2LQ9BRP1 358 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 TGIF2Q9GZN2 237 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 EPC1Q9H2F5 836 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 TBC1D17Q9HA65 648 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 GOLGA2P5Q9HBQ8 144 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 TCP11L1Q9NUJ3 509 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 COL20A1Q9P218 1284 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 TUBE1Q9UJT0 475 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 PADI3Q9ULW8 664 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 SOX13Q9UN79 622 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 SMG5Q9UPR3 1016 aaKnown RBP4.71□□□□□ -1.66
SNHG1-220ENST00000544550 TRPV2Q9Y5S1 764 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 CDY2AQ9Y6F7 541 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 NLRC5Q86WI3 1866 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 BRWD1Q9NSI6 2320 aa4.71□□□□□ -1.66
SNHG1-220ENST00000544550 DENND3A2RUS2 1198 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 MBLAC1A4D2B0 266 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 KRBA1A5PL33 1030 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 C2orf71A6NGG8 1288 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 RRN3P2A6NIE6 340 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 NMT2O60551 498 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 CLASP2O75122 1294 aaKnown RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 RGS9O75916 674 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 CFBP00751 764 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 PROS1P07225 676 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 DCNP07585 359 aaKnown RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 SNHG28P0DPA3 235 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 SRFP11831 508 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 PMLP29590 882 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 CA8P35219 290 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 HSD17B4P51659 736 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 APOBRQ0VD83 1088 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 TRAF1Q13077 416 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 PPFIA1Q13136 1202 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 C15orf39Q6ZRI6 1047 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 STOX1Q6ZVD7 989 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 SLC24A5Q71RS6 500 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 VN1R5Q7Z5H4 357 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 CACTIN-AS1Q8N1I8 211 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 LRRC43Q8N309 656 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 MRPL43Q8N983 215 aaKnown RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 GIMAP8Q8ND71 665 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 PJA1Q8NG27 643 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 DNAJB3Q8WWF6 145 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 GPATCH3Q96I76 525 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 TTC14Q96N46 770 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 ZNF558Q96NG5 402 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 RSRP1Q9BUV0 290 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 FAM126AQ9BYI3 521 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 CEP44Q9C0F1 390 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 CLEC4MQ9H2X3 399 aaPredicted RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 ELAC1Q9H777 363 aaKnown RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 SFXN1Q9H9B4 322 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 AGO3Q9H9G7 860 aaKnown RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 ATP6V0A4Q9HBG4 840 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 SRA1Q9HD15 236 aaKnown RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 ARHGEF3Q9NR81 526 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 TYW1Q9NV66 732 aaKnown RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 TMEM161AQ9NX61 479 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 ZSCAN32Q9NX65 697 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 ERAP1Q9NZ08 941 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 SPG21Q9NZD8 308 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 DLGAP2Q9P1A6 1054 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 STK39Q9UEW8 545 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 GGT7Q9UJ14 662 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 CDH22Q9UJ99 828 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 RALYQ9UKM9 306 aaKnown RBP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 RAB23Q9ULC3 237 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms