RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 RGL1Q9NZL6 768 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 C10orf71Q711Q0 1435 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 IGKV6D-41A0A0C4DH26 115 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 A0A1W2PRG0 241 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 MAPK13O15264 365 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 ATP6V1C1P21283 382 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 NFIL3Q16649 462 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 ANKRD35Q8N283 1001 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 ZNF564Q8TBZ8 553 aaPredicted RBP13.4□□□□□ -0.26
SMCR5-201ENST00000543475 CCDC77Q9BR77 488 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 PLVAPQ9BX97 442 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 CPSF2Q9P2I0 782 aaKnown RBP13.4□□□□□ -0.26
SMCR5-201ENST00000543475 BCS1LQ9Y276 419 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 USH1CQ9Y6N9 552 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 MYH11P35749 1972 aa13.4□□□□□ -0.26
SMCR5-201ENST00000543475 RASA4BC9J798 803 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 H0Y3Z8 333 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 RASA4O43374 803 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 EXOC3O60645 756 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 TCEA3O75764 348 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 TM4SF1P30408 202 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 BFSP1Q12934 665 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 DDB1Q16531 1140 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 SLCO2A1Q92959 643 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 EIF2AK1Q9BQI3 630 aaKnown RBP13.4□□□□□ -0.27
SMCR5-201ENST00000543475 NUP85Q9BW27 656 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 KIAA1683Q9H0B3 1180 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 PARVGQ9HBI0 331 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 AGPAT3Q9NRZ7 376 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 NINJ2Q9NZG7 142 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 LGALS13Q9UHV8 139 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 CHKBQ9Y259 395 aa13.4□□□□□ -0.27
SMCR5-201ENST00000543475 KLHL33A6NCF5 533 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 FAM47DPA6NHR8 397 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 POTEJP0CG39 1038 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 CETPP11597 493 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 PECAM1P16284 738 aaPredicted RBP13.39□□□□□ -0.27
SMCR5-201ENST00000543475 ALDH3A1P30838 453 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 YARSP54577 528 aaKnown RBP13.39□□□□□ -0.27
SMCR5-201ENST00000543475 DNAJC3Q13217 504 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 NFIXQ14938 502 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 TSNAXIP1Q2TAA8 658 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 ZNF449Q6P9G9 518 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 LONP2Q86WA8 852 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 SLF2Q8IX21 1173 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 MARCH10Q8NA82 808 aaPredicted RBP13.39□□□□□ -0.27
SMCR5-201ENST00000543475 RNF217Q8TC41 542 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 INPP5DQ92835 1189 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 FAM20AQ96MK3 541 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 ANAPC5Q9UJX4 755 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
SMCR5-201ENST00000543475 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 AP1G2O75843 785 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 MTA2O94776 668 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 ATF2P15336 505 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 CHRNB2P17787 502 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 GM2AP17900 193 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 ADCY8P40145 1251 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 VPS41P49754 854 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 RASSF2P50749 326 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 PAPOLAP51003 745 aaKnown RBP13.39□□□□□ -0.27
SMCR5-201ENST00000543475 AP3B2Q13367 1082 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 Q4G0T1 1027 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 MFSD14BQ5SR56 506 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 TBC1D10AQ9BXI6 508 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 PAPOLBQ9NRJ5 636 aaKnown RBP13.39□□□□□ -0.27
SMCR5-201ENST00000543475 PHTF1Q9UMS5 762 aa13.39□□□□□ -0.27
SMCR5-201ENST00000543475 ABLIM1O14639 778 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 MEIS2O14770 477 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 DCTN3O75935 186 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 GAS8O95995 478 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 EPHB2P29323 1055 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 PTDSS1P48651 473 aaKnown RBP13.38□□□□□ -0.27
SMCR5-201ENST00000543475 KCNQ4P56696 695 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 CETN1Q12798 172 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 TMED2Q15363 201 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 STXBP4Q6ZWJ1 553 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 ARHGEF19Q8IW93 802 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 FAM178BQ8IXR5 827 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 LINC00116Q8NCU8 138 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 LMO3Q8TAP4 145 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 LENG9Q96B70 501 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 PWWP2AQ96N64 755 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 PCDHB18PQ96TA0 734 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 POLR3CQ9BUI4 534 aaPredicted RBP13.38□□□□□ -0.27
SMCR5-201ENST00000543475 TRAIPQ9BWF2 469 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 ETAA1Q9NY74 926 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 ACTL7BQ9Y614 415 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 GSTTP1A0A1W2PQM5 241 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 GNAT1P11488 350 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 WDR4P57081 412 aaKnown RBP13.38□□□□□ -0.27
SMCR5-201ENST00000543475 CAV1Q03135 178 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 GABPAQ06546 454 aa13.38□□□□□ -0.27
SMCR5-201ENST00000543475 KLC1Q07866 573 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms