RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 RTP2Q5QGT7 225 aa15.97■□□□□ 0.15
CTSB-221ENST00000531502 PRSS55Q6UWB4 352 aaPredicted RBP15.97■□□□□ 0.15
CTSB-221ENST00000531502 GET4Q7L5D6 327 aaPredicted RBP15.97■□□□□ 0.15
CTSB-221ENST00000531502 HACE1Q8IYU2 909 aa15.97■□□□□ 0.15
CTSB-221ENST00000531502 PIGOQ8TEQ8 1089 aa15.97■□□□□ 0.15
CTSB-221ENST00000531502 POLR3FQ9H1D9 316 aaPredicted RBP15.97■□□□□ 0.15
CTSB-221ENST00000531502 TTC12Q9H892 705 aaPredicted RBP15.97■□□□□ 0.15
CTSB-221ENST00000531502 PIDD1Q9HB75 910 aa15.97■□□□□ 0.15
CTSB-221ENST00000531502 SLC2A4RGQ9NR83 387 aa15.97■□□□□ 0.15
CTSB-221ENST00000531502 ORC3Q9UBD5 711 aaPredicted RBP15.97■□□□□ 0.15
CTSB-221ENST00000531502 STK25O00506 426 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 KRT2P35908 639 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 ID4P47928 161 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 CREMQ03060 361 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 HSP90AA2PQ14568 343 aaPredicted RBP15.96■□□□□ 0.15
CTSB-221ENST00000531502 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 ERMP1Q7Z2K6 904 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 ST13P5Q8NFI4 369 aaPredicted RBP15.96■□□□□ 0.15
CTSB-221ENST00000531502 MTMR9Q96QG7 549 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 CLSTN3Q9BQT9 956 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 RPP25Q9BUL9 199 aaKnown RBP15.96■□□□□ 0.15
CTSB-221ENST00000531502 CXCL16Q9H2A7 254 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 SEMA4AQ9H3S1 761 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 GPRC5CQ9NQ84 441 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 ARHGEF3Q9NR81 526 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 PARP2Q9UGN5 583 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 FBXW11Q9UKB1 542 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 NUMBLQ9Y6R0 609 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 CACNA1IQ9P0X4 2223 aa15.96■□□□□ 0.15
CTSB-221ENST00000531502 VWA8A3KMH1 1905 aa15.96■□□□□ 0.14
CTSB-221ENST00000531502 TTLL13PA6NNM8 815 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 PTGESO14684 152 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 TADA2AO75478 443 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 DCNP07585 359 aaKnown RBP15.95■□□□□ 0.14
CTSB-221ENST00000531502 SPATA31C1P0DKV0 1188 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 XRCC6P12956 609 aaKnown RBP eCLIP15.95■□□□□ 0.14
CTSB-221ENST00000531502 GLULP15104 373 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 TUSC3Q13454 348 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 NAB2Q15742 525 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 CALCRLQ16602 461 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 FAM187BQ17R55 369 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 CDCA2Q69YH5 1023 aaPredicted RBP15.95■□□□□ 0.14
CTSB-221ENST00000531502 LNX1Q8TBB1 728 aaPredicted RBP15.95■□□□□ 0.14
CTSB-221ENST00000531502 PRIMPOLQ96LW4 560 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 FZD8Q9H461 694 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 ZFP37Q9Y6Q3 630 aaPredicted RBP15.95■□□□□ 0.14
CTSB-221ENST00000531502 R4GN57 208 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 MYH15Q9Y2K3 1946 aa15.95■□□□□ 0.14
CTSB-221ENST00000531502 SF3B1O75533 1304 aaKnown RBP eCLIP15.94■□□□□ 0.147e-10■■■■■ 92.9
CTSB-221ENST00000531502 NOTCH4Q99466 2003 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 OTOGLQ3ZCN5 2332 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 ADAM12O43184 909 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 USO1O60763 962 aaKnown RBP15.94■□□□□ 0.14
CTSB-221ENST00000531502 KIF4AO95239 1232 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 LMNAP02545 664 aaKnown RBP15.94■□□□□ 0.14
CTSB-221ENST00000531502 FSHRP23945 695 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 TXKP42681 527 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 STARD6P59095 220 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 NTHL1P78549 312 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 DCLRE1AQ6PJP8 1040 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 PARM1Q6UWI2 310 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 GRASPQ7Z6J2 395 aaPredicted RBP15.94■□□□□ 0.14
CTSB-221ENST00000531502 HASPINQ8TF76 798 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 PIK3R5Q8WYR1 880 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 WASF1Q92558 559 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 FGF14Q92915 247 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 TTPALQ9BTX7 342 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 PRMT7Q9NVM4 692 aaPredicted RBP15.94■□□□□ 0.14
CTSB-221ENST00000531502 SIT1Q9Y3P8 196 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 DMXL1Q9Y485 3027 aa15.94■□□□□ 0.14
CTSB-221ENST00000531502 COL4A3Q01955 1670 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 CASTOR2A6NHX0 329 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 POTEMA6NI47 508 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 LRRIQ4A6NIV6 560 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 BTBD18B2RXH4 712 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 NEMFO60524 1076 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 SP9P0CG40 484 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 GPC5P78333 572 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 SPECC1Q5M775 1068 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 MAEAQ7L5Y9 396 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 C1orf210Q8IVY1 113 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 FOXQ1Q9C009 403 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 TMEM60Q9H2L4 133 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 PDZD7Q9H5P4 517 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 SNTG2Q9NY99 539 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 CDH7Q9ULB5 785 aa15.93■□□□□ 0.14
CTSB-221ENST00000531502 LARGE1O95461 756 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 EDN1P05305 212 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 HNRNPA1P09651 372 aaKnown RBP eCLIP15.92■□□□□ 0.14
CTSB-221ENST00000531502 RFX1P22670 979 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 IGFBP6P24592 240 aaPredicted RBP15.92■□□□□ 0.14
CTSB-221ENST00000531502 HOXA9P31269 272 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 PSMD5Q16401 504 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 FAM171A1Q5VUB5 890 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 CATSPER3Q86XQ3 398 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 MAML2Q8IZL2 1156 aaPredicted RBP15.92■□□□□ 0.14
CTSB-221ENST00000531502 NECAB1Q8N987 351 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 NSUN7Q8NE18 718 aaKnown RBP15.92■□□□□ 0.14
CTSB-221ENST00000531502 PJA1Q8NG27 643 aa15.92■□□□□ 0.14
CTSB-221ENST00000531502 BSNDQ8WZ55 320 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms