RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 C1QTNF1Q9BXJ1 281 aa13.96□□□□□ -0.17
PACS1-210ENST00000529795 LRRC27Q9C0I9 530 aa13.96□□□□□ -0.17
PACS1-210ENST00000529795 POLD4Q9HCU8 107 aa13.96□□□□□ -0.17
PACS1-210ENST00000529795 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.96□□□□□ -0.17
PACS1-210ENST00000529795 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
PACS1-210ENST00000529795 SNTG2Q9NY99 539 aa13.96□□□□□ -0.17
PACS1-210ENST00000529795 ADAM28Q9UKQ2 775 aa13.96□□□□□ -0.17
PACS1-210ENST00000529795 PRG3Q9Y2Y8 225 aaPredicted RBP13.96□□□□□ -0.17
PACS1-210ENST00000529795 VCANP13611 3396 aa13.96□□□□□ -0.18
PACS1-210ENST00000529795 SF3B1O75533 1304 aaKnown RBP eCLIP13.95□□□□□ -0.18
PACS1-210ENST00000529795 SFI1A8K8P3 1242 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 SLC16A4O15374 487 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 CLDN3O15551 220 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 TOM1L1O75674 476 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 RECQL4O94761 1208 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 ADH1AP07327 375 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 ALADP13716 330 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 KLRC2P26717 231 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 GRM5P41594 1212 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 GLUD2P49448 558 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 AFF1P51825 1210 aaKnown RBP13.95□□□□□ -0.18
PACS1-210ENST00000529795 NCKAP1LP55160 1127 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
PACS1-210ENST00000529795 DLX2Q07687 328 aaPredicted RBP13.95□□□□□ -0.18
PACS1-210ENST00000529795 RAD51AP2Q09MP3 1159 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 KCNC3Q14003 757 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 DHX8Q14562 1220 aaKnown RBP13.95□□□□□ -0.18
PACS1-210ENST00000529795 KARSQ15046 597 aaKnown RBP13.95□□□□□ -0.18
PACS1-210ENST00000529795 CLUL1Q15846 466 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 ANKRD54Q6NXT1 300 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 MPZL3Q6UWV2 235 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 SV2BQ7L1I2 683 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 MYCT1Q8N699 235 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 TMEM161BQ8NDZ6 487 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 BICD1Q96G01 975 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 NECTIN4Q96NY8 510 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 ACAP3Q96P50 834 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 KIFC3Q9BVG8 833 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 HERC2P3Q9BVR0 1158 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 MIOSQ9NXC5 875 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 KLK14Q9P0G3 267 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 CLEC1BQ9P126 229 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
PACS1-210ENST00000529795 CFAP45Q9UL16 551 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 GDAQ9Y2T3 454 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 PCDHGC5Q9Y5F6 944 aa13.95□□□□□ -0.18
PACS1-210ENST00000529795 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 TRAPPC3O43617 180 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 TRAK2O60296 914 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 CLASP2O75122 1294 aaKnown RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 PPP6R2O75170 966 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 YEATS4O95619 227 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 BRD1O95696 1058 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 GLP2RO95838 553 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 MAPTP10636 758 aaKnown RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 MATR3P43243 847 aaKnown RBP eCLIP13.94□□□□□ -0.18
PACS1-210ENST00000529795 NASPP49321 788 aaPredicted RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 MCM6Q14566 821 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 HSP90AA2PQ14568 343 aaPredicted RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 EEF1DP3Q658K8 133 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 HAUS6Q7Z4H7 955 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 TMEM173Q86WV6 379 aaPredicted RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 GSTCDQ8NEC7 633 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 DDX27Q96GQ7 796 aaKnown RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 USP28Q96RU2 1077 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 REEP2Q9BRK0 252 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 TARS2Q9BW92 718 aaKnown RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 BLOC1S4Q9NUP1 217 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 SEL1LQ9UBV2 794 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 BARX2Q9UMQ3 279 aaPredicted RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 HCFC2Q9Y5Z7 792 aa13.94□□□□□ -0.18
PACS1-210ENST00000529795 MTCL1Q9Y4B5 1905 aaKnown RBP13.94□□□□□ -0.18
PACS1-210ENST00000529795 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 SPTLC2O15270 562 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
PACS1-210ENST00000529795 MTHFRP42898 656 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 ZNF131P52739 623 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 NOLC1Q14978 699 aaKnown RBP eCLIP13.93□□□□□ -0.18
PACS1-210ENST00000529795 PTPN14Q15678 1187 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 LLGL2Q6P1M3 1020 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 FUT10Q6P4F1 479 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 HDAC7Q8WUI4 952 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 EPSTI1Q96J88 318 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 RIPOR3Q96MK2 946 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 NECAB3Q96P71 396 aaPredicted RBP13.93□□□□□ -0.18
PACS1-210ENST00000529795 TSPAN18Q96SJ8 248 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 PHF7Q9BWX1 381 aaPredicted RBP13.93□□□□□ -0.18
PACS1-210ENST00000529795 CDT1Q9H211 546 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 ZHX3Q9H4I2 956 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 PTPRHQ9HD43 1115 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 FNIP2Q9P278 1114 aa13.93□□□□□ -0.18
PACS1-210ENST00000529795 XPOTO43592 962 aaKnown RBP13.92□□□□□ -0.18
PACS1-210ENST00000529795 GAP43P17677 238 aa13.92□□□□□ -0.18
PACS1-210ENST00000529795 PROZP22891 400 aa13.92□□□□□ -0.18
PACS1-210ENST00000529795 STAT6P42226 847 aa13.92□□□□□ -0.18
PACS1-210ENST00000529795 LIG4P49917 911 aa13.92□□□□□ -0.18
PACS1-210ENST00000529795 AMPD3Q01432 767 aa13.92□□□□□ -0.18
PACS1-210ENST00000529795 DSG1Q02413 1049 aa13.92□□□□□ -0.18
PACS1-210ENST00000529795 ZP2Q05996 745 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms