RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 DNAJC25Q9H1X3 360 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 UBN1Q9NPG3 1134 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 SNTG2Q9NY99 539 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 CXXC1Q9P0U4 656 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-205ENST00000526954 CPSF3Q9UKF6 684 aaKnown RBP18.01■□□□□ 0.47
CAPN1-205ENST00000526954 HES2Q9Y543 173 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 PCDHB7Q9Y5E2 793 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 RALGAPA2Q2PPJ7 1873 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 MAPK13O15264 365 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 ADRB2P07550 413 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 ITGA4P13612 1032 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 KCNJ6P48051 423 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 ZNF445P59923 1031 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 DEFB103AP81534 67 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 ANO6Q4KMQ2 910 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 ZBTB41Q5SVQ8 909 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 AGMOQ6ZNB7 445 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 LRRC55Q6ZSA7 311 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 ZSWIM2Q8NEG5 633 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 ENOX1Q8TC92 643 aaKnown RBP18■□□□□ 0.47
CAPN1-205ENST00000526954 PHOSPHO2Q8TCD6 241 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 SAAL1Q96ER3 474 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 BPIFA3Q9BQP9 254 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 FAM213AQ9BRX8 229 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 UBE2OQ9C0C9 1292 aaKnown RBP18■□□□□ 0.47
CAPN1-205ENST00000526954 GIT1Q9Y2X7 761 aa18■□□□□ 0.47
CAPN1-205ENST00000526954 FNDC1Q4ZHG4 1894 aaPredicted RBP18■□□□□ 0.47
CAPN1-205ENST00000526954 GOLGA8IPA6NC78 632 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 GOLGA8JA6NMD2 632 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 ZBBXA8MT70 800 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 CETN3O15182 167 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 EXOC3O60645 756 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 CAVIN2O95810 425 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 TNFSF9P41273 254 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 ACOT2P49753 483 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 SHHQ15465 462 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 SEZ6Q53EL9 994 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 LRSAM1Q6UWE0 723 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 ALKAL1Q6UXT8 129 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 TMEM192Q8IY95 271 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 CSGALNACT2Q8N6G5 542 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 RSPH1Q8WYR4 309 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 LPPQ93052 612 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 CEP63Q96MT8 703 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 SLC9A7Q96T83 725 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 MKNK1Q9BUB5 465 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 PLEKHA5Q9HAU0 1116 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 RNF19AQ9NV58 838 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 LRFN2Q9ULH4 789 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 SLC4A7Q9Y6M7 1214 aa17.99■□□□□ 0.47
CAPN1-205ENST00000526954 PDCD11Q14690 1871 aaKnown RBP17.99■□□□□ 0.47
CAPN1-205ENST00000526954 ZNF233A6NK53 670 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 MEIS3P2A8K0S8 358 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 INPPL1O15357 1258 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 HOXA2O43364 376 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 RECQL4O94761 1208 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 AKAP5P24588 427 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 YARSP54577 528 aaKnown RBP17.98■□□□□ 0.47
CAPN1-205ENST00000526954 MCCD1P59942 119 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-205ENST00000526954 OSTNP61366 133 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 ENOX2Q16206 610 aaKnown RBP17.98■□□□□ 0.47
CAPN1-205ENST00000526954 SNRNP35Q16560 246 aaKnown RBP17.98■□□□□ 0.47
CAPN1-205ENST00000526954 SLC10A6Q3KNW5 377 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 XKR4Q5GH76 650 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 SPATA1Q5VX52 437 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 FILIP1Q7Z7B0 1213 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 BRSK2Q8IWQ3 736 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 CD302Q8IX05 232 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 APOL6Q9BWW8 343 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 PRO3102Q9H379 93 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 RPF1Q9H9Y2 349 aaKnown RBP17.98■□□□□ 0.47
CAPN1-205ENST00000526954 RSAD1Q9HA92 442 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 TOPORSQ9NS56 1045 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-205ENST00000526954 PARP2Q9UGN5 583 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 FRMD4BQ9Y2L6 1034 aa17.98■□□□□ 0.47
CAPN1-205ENST00000526954 TTC26A0AVF1 554 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 MEFVO15553 781 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-205ENST00000526954 OFD1O75665 1012 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 DGKIO75912 1065 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 AKAP3O75969 853 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 FGFR1OPO95684 399 aaKnown RBP17.97■□□□□ 0.47
CAPN1-205ENST00000526954 CXCL8P10145 99 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 CASP4P49662 377 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 CLLU1OSQ5K130 101 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 CEP135Q66GS9 1140 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 CBWD2Q8IUF1 395 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 RNF169Q8NCN4 708 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 SNX27Q96L92 541 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 RNPC3Q96LT9 517 aaKnown RBP17.97■□□□□ 0.47
CAPN1-205ENST00000526954 MFSD14AQ96MC6 490 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 TSPAN18Q96SJ8 248 aa17.97■□□□□ 0.47
CAPN1-205ENST00000526954 SRRTQ9BXP5 876 aaKnown RBP17.97■□□□□ 0.47
CAPN1-205ENST00000526954 TDRD15B5MCY1 1934 aaKnown RBP17.97■□□□□ 0.47
CAPN1-205ENST00000526954 ARL5CA6NH57 179 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 IKBKBO14920 756 aa17.96■□□□□ 0.47
CAPN1-205ENST00000526954 SLC16A3O15427 465 aaKnown RBP17.96■□□□□ 0.47
CAPN1-205ENST00000526954 UPP2O95045 317 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms